==25812== Memcheck, a memory error detector ==25812== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25812== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25812== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==25812== Parent PID: 24607 ==25812== ==25812== ==25812== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25812== Open file descriptor 12: ==25812== at 0x735F0ED: pipe (pipe.c:29) ==25812== by 0x104F407D: ??? ==25812== by 0x9F754CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25812== by 0x765E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25812== by 0x75F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25812== by 0x77E5D38: PetscInitialize (pinit.c:924) ==25812== by 0x690BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25812== by 0x690BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25812== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25812== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25812== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25812== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25812== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25812== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25812== ==25812== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25812== at 0x7363A8C: __open_nocancel (open64_nocancel.c:39) ==25812== by 0x72E7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25812== by 0x6949822: ??? ==25812== by 0x694996F: ??? ==25812== by 0xA01A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25812== by 0xA01A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25812== by 0x9FD0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25812== by 0x9F752DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25812== by 0x765E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25812== by 0x75F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25812== by 0x77E5D38: PetscInitialize (pinit.c:924) ==25812== by 0x690BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25812== by 0x690BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25812== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25812== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25812== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25812== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25812== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25812== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25812== ==25812== Open file descriptor 145: ==25812== ==25812== ==25812== Open file descriptor 142: ==25812== ==25812== ==25812== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==25812== ==25812== ==25812== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25812== ==25812== ==25812== ==25812== HEAP SUMMARY: ==25812== in use at exit: 618,327 bytes in 8,239 blocks ==25812== total heap usage: 206,014 allocs, 197,775 frees, 1,394,809,245 bytes allocated ==25812== ==25812== LEAK SUMMARY: ==25812== definitely lost: 0 bytes in 0 blocks ==25812== indirectly lost: 0 bytes in 0 blocks ==25812== possibly lost: 0 bytes in 0 blocks ==25812== still reachable: 24 bytes in 2 blocks ==25812== suppressed: 618,303 bytes in 8,237 blocks ==25812== Reachable blocks (those to which a pointer was found) are not shown. ==25812== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25812== ==25812== For lists of detected and suppressed errors, rerun with: -s ==25812== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)