==26560== Memcheck, a memory error detector ==26560== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26560== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26560== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==26560== Parent PID: 24752 ==26560== ==26560== ==26560== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26560== Open file descriptor 12: ==26560== at 0xF10A0ED: pipe (pipe.c:29) ==26560== by 0x1972E07D: ??? ==26560== by 0x13CC94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26560== by 0xED57418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26560== by 0xECF0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26560== by 0xD9E7D38: PetscInitialize (pinit.c:924) ==26560== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26560== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26560== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26560== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26560== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26560== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26560== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26560== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==26560== ==26560== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26560== at 0xF10EA8C: __open_nocancel (open64_nocancel.c:39) ==26560== by 0xF092BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26560== by 0xD54D822: ??? ==26560== by 0xD54D96F: ??? ==26560== by 0x13D6E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26560== by 0x13D6E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26560== by 0x13D24922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26560== by 0x13CC92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26560== by 0xED57418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26560== by 0xECF0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26560== by 0xD9E7D38: PetscInitialize (pinit.c:924) ==26560== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26560== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26560== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26560== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26560== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26560== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26560== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26560== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==26560== ==26560== Open file descriptor 145: ==26560== ==26560== ==26560== Open file descriptor 142: ==26560== ==26560== ==26560== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==26560== ==26560== ==26560== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26560== ==26560== ==26560== ==26560== HEAP SUMMARY: ==26560== in use at exit: 618,423 bytes in 8,240 blocks ==26560== total heap usage: 55,731 allocs, 47,491 frees, 1,339,537,443 bytes allocated ==26560== ==26560== LEAK SUMMARY: ==26560== definitely lost: 0 bytes in 0 blocks ==26560== indirectly lost: 0 bytes in 0 blocks ==26560== possibly lost: 0 bytes in 0 blocks ==26560== still reachable: 56 bytes in 3 blocks ==26560== suppressed: 618,367 bytes in 8,237 blocks ==26560== Reachable blocks (those to which a pointer was found) are not shown. ==26560== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26560== ==26560== For lists of detected and suppressed errors, rerun with: -s ==26560== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)