==27033== Memcheck, a memory error detector ==27033== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27033== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27033== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==27033== Parent PID: 24752 ==27033== ==27033== ==27033== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27033== Open file descriptor 12: ==27033== at 0xF95C0ED: pipe (pipe.c:29) ==27033== by 0x1972D07D: ??? ==27033== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27033== by 0x10256418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27033== by 0x101EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27033== by 0x103DDD38: PetscInitialize (pinit.c:924) ==27033== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27033== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27033== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27033== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27033== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27033== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27033== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27033== by 0x133475: main (TestNumericalMethods.cpp:19) ==27033== ==27033== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27033== at 0xF960A8C: __open_nocancel (open64_nocancel.c:39) ==27033== by 0xF8E4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27033== by 0xF1B3822: ??? ==27033== by 0xF1B396F: ??? ==27033== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27033== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27033== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27033== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27033== by 0x10256418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27033== by 0x101EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27033== by 0x103DDD38: PetscInitialize (pinit.c:924) ==27033== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27033== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27033== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27033== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27033== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27033== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27033== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27033== by 0x133475: main (TestNumericalMethods.cpp:19) ==27033== ==27033== Open file descriptor 145: ==27033== ==27033== ==27033== Open file descriptor 142: ==27033== ==27033== ==27033== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==27033== ==27033== ==27033== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27033== ==27033== ==27033== ==27033== HEAP SUMMARY: ==27033== in use at exit: 618,423 bytes in 8,240 blocks ==27033== total heap usage: 69,488 allocs, 61,248 frees, 1,342,191,939 bytes allocated ==27033== ==27033== LEAK SUMMARY: ==27033== definitely lost: 0 bytes in 0 blocks ==27033== indirectly lost: 0 bytes in 0 blocks ==27033== possibly lost: 0 bytes in 0 blocks ==27033== still reachable: 56 bytes in 3 blocks ==27033== suppressed: 618,367 bytes in 8,237 blocks ==27033== Reachable blocks (those to which a pointer was found) are not shown. ==27033== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27033== ==27033== For lists of detected and suppressed errors, rerun with: -s ==27033== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)