==41104== Memcheck, a memory error detector ==41104== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41104== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41104== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==41104== Parent PID: 23996 ==41104== ==41104== ==41104== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41104== Open file descriptor 12: ==41104== at 0xBC220ED: pipe (pipe.c:29) ==41104== by 0x1434607D: ??? ==41104== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41104== by 0xB52A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41104== by 0xB4C3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41104== by 0x81F1D38: PetscInitialize (pinit.c:924) ==41104== by 0xB3CFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41104== by 0xB3CFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41104== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41104== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41104== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41104== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41104== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41104== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41104== ==41104== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41104== at 0xBC26A8C: __open_nocancel (open64_nocancel.c:39) ==41104== by 0xBBAABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41104== by 0xB40D822: ??? ==41104== by 0xB40D96F: ??? ==41104== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41104== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41104== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41104== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41104== by 0xB52A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41104== by 0xB4C3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41104== by 0x81F1D38: PetscInitialize (pinit.c:924) ==41104== by 0xB3CFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41104== by 0xB3CFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41104== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41104== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41104== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41104== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41104== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41104== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==41104== ==41104== Open file descriptor 145: ==41104== ==41104== ==41104== Open file descriptor 142: ==41104== ==41104== ==41104== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==41104== ==41104== ==41104== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41104== ==41104== ==41104== ==41104== HEAP SUMMARY: ==41104== in use at exit: 618,887 bytes in 8,249 blocks ==41104== total heap usage: 428,258 allocs, 420,009 frees, 1,437,732,496 bytes allocated ==41104== ==41104== LEAK SUMMARY: ==41104== definitely lost: 0 bytes in 0 blocks ==41104== indirectly lost: 0 bytes in 0 blocks ==41104== possibly lost: 0 bytes in 0 blocks ==41104== still reachable: 24 bytes in 2 blocks ==41104== suppressed: 618,863 bytes in 8,247 blocks ==41104== Reachable blocks (those to which a pointer was found) are not shown. ==41104== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41104== ==41104== For lists of detected and suppressed errors, rerun with: -s ==41104== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 52 from 35)