==41557== Memcheck, a memory error detector ==41557== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41557== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41557== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==41557== Parent PID: 23968 ==41557== ==41557== ==41557== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41557== Open file descriptor 12: ==41557== at 0x87C20ED: pipe (pipe.c:29) ==41557== by 0x1434707D: ??? ==41557== by 0xC8BB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41557== by 0x8B90418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41557== by 0x8B29D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41557== by 0x906BD38: PetscInitialize (pinit.c:924) ==41557== by 0x83EDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41557== by 0x83EDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41557== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41557== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41557== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41557== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41557== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41557== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41557== ==41557== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41557== at 0x87C6A8C: __open_nocancel (open64_nocancel.c:39) ==41557== by 0x874ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41557== by 0x842B822: ??? ==41557== by 0x842B96F: ??? ==41557== by 0xC9606DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41557== by 0xC960938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41557== by 0xC916922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41557== by 0xC8BB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41557== by 0x8B90418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41557== by 0x8B29D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41557== by 0x906BD38: PetscInitialize (pinit.c:924) ==41557== by 0x83EDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41557== by 0x83EDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41557== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41557== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41557== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41557== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41557== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41557== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41557== ==41557== Open file descriptor 145: ==41557== ==41557== ==41557== Open file descriptor 142: ==41557== ==41557== ==41557== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==41557== ==41557== ==41557== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41557== ==41557== ==41557== ==41557== HEAP SUMMARY: ==41557== in use at exit: 621,939 bytes in 8,243 blocks ==41557== total heap usage: 3,054,223 allocs, 3,045,980 frees, 1,613,057,982 bytes allocated ==41557== ==41557== LEAK SUMMARY: ==41557== definitely lost: 0 bytes in 0 blocks ==41557== indirectly lost: 0 bytes in 0 blocks ==41557== possibly lost: 0 bytes in 0 blocks ==41557== still reachable: 3,629 bytes in 10 blocks ==41557== suppressed: 618,310 bytes in 8,233 blocks ==41557== Reachable blocks (those to which a pointer was found) are not shown. ==41557== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41557== ==41557== For lists of detected and suppressed errors, rerun with: -s ==41557== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)