==43291== Memcheck, a memory error detector ==43291== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43291== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43291== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainFitzHughNagumo -malloc_debug -malloc_dump -memory_info ==43291== Parent PID: 23998 ==43291== ==43291== ==43291== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43291== Open file descriptor 12: ==43291== at 0xA7FC0ED: pipe (pipe.c:29) ==43291== by 0x1434707D: ??? ==43291== by 0xD5F64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43291== by 0xABC8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43291== by 0xAB61D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43291== by 0xB0A5D38: PetscInitialize (pinit.c:924) ==43291== by 0xA0E0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43291== by 0xA0E0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43291== by 0x1211B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43291== by 0x11C2B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43291== by 0x11E6C2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43291== by 0x11E5BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43291== by 0x11EBD1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43291== by 0x11AAB5: main (TestMonodomainFitzHughNagumo.cpp:18) ==43291== ==43291== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43291== at 0xA800A8C: __open_nocancel (open64_nocancel.c:39) ==43291== by 0xA784BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43291== by 0xA11E822: ??? ==43291== by 0xA11E96F: ??? ==43291== by 0xD69B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43291== by 0xD69B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43291== by 0xD651922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43291== by 0xD5F62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43291== by 0xABC8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43291== by 0xAB61D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43291== by 0xB0A5D38: PetscInitialize (pinit.c:924) ==43291== by 0xA0E0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43291== by 0xA0E0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43291== by 0x1211B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43291== by 0x11C2B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43291== by 0x11E6C2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43291== by 0x11E5BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43291== by 0x11EBD1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43291== by 0x11AAB5: main (TestMonodomainFitzHughNagumo.cpp:18) ==43291== ==43291== Open file descriptor 145: ==43291== ==43291== ==43291== Open file descriptor 142: ==43291== ==43291== ==43291== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainFitzHughNagumo_valgrind.txt ==43291== ==43291== ==43291== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43291== ==43291== ==43291== ==43291== HEAP SUMMARY: ==43291== in use at exit: 618,887 bytes in 8,249 blocks ==43291== total heap usage: 80,869 allocs, 72,620 frees, 1,344,577,282 bytes allocated ==43291== ==43291== LEAK SUMMARY: ==43291== definitely lost: 0 bytes in 0 blocks ==43291== indirectly lost: 0 bytes in 0 blocks ==43291== possibly lost: 0 bytes in 0 blocks ==43291== still reachable: 24 bytes in 2 blocks ==43291== suppressed: 618,863 bytes in 8,247 blocks ==43291== Reachable blocks (those to which a pointer was found) are not shown. ==43291== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43291== ==43291== For lists of detected and suppressed errors, rerun with: -s ==43291== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 38)