==41497== Memcheck, a memory error detector ==41497== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41497== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41497== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==41497== Parent PID: 24016 ==41497== ==41497== ==41497== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41497== Open file descriptor 12: ==41497== at 0x9C790ED: pipe (pipe.c:29) ==41497== by 0x1434807D: ??? ==41497== by 0xEE3B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41497== by 0x98C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41497== by 0x985FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41497== by 0x81F1D38: PetscInitialize (pinit.c:924) ==41497== by 0x976BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41497== by 0x976BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41497== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41497== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41497== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41497== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41497== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41497== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41497== ==41497== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41497== at 0x9C7DA8C: __open_nocancel (open64_nocancel.c:39) ==41497== by 0x9C01BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41497== by 0x97A3822: ??? ==41497== by 0x97A396F: ??? ==41497== by 0xEEE06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41497== by 0xEEE0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41497== by 0xEE96922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41497== by 0xEE3B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41497== by 0x98C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41497== by 0x985FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41497== by 0x81F1D38: PetscInitialize (pinit.c:924) ==41497== by 0x976BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41497== by 0x976BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41497== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41497== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41497== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41497== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41497== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41497== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41497== ==41497== Open file descriptor 145: ==41497== ==41497== ==41497== Open file descriptor 142: ==41497== ==41497== ==41497== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==41497== ==41497== ==41497== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41497== ==41497== ==41497== ==41497== HEAP SUMMARY: ==41497== in use at exit: 618,334 bytes in 8,235 blocks ==41497== total heap usage: 74,042 allocs, 65,807 frees, 1,342,978,366 bytes allocated ==41497== ==41497== LEAK SUMMARY: ==41497== definitely lost: 0 bytes in 0 blocks ==41497== indirectly lost: 0 bytes in 0 blocks ==41497== possibly lost: 0 bytes in 0 blocks ==41497== still reachable: 24 bytes in 2 blocks ==41497== suppressed: 618,310 bytes in 8,233 blocks ==41497== Reachable blocks (those to which a pointer was found) are not shown. ==41497== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41497== ==41497== For lists of detected and suppressed errors, rerun with: -s ==41497== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)