==39567== Memcheck, a memory error detector ==39567== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39567== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39567== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVolumeTrackingModifier -malloc_debug -malloc_dump -memory_info ==39567== Parent PID: 24016 ==39567== ==39567== ==39567== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39567== Open file descriptor 12: ==39567== at 0xF8B70ED: pipe (pipe.c:29) ==39567== by 0x1972D07D: ??? ==39567== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39567== by 0x101B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39567== by 0x1014AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39567== by 0x102F6D38: PetscInitialize (pinit.c:924) ==39567== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39567== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39567== by 0x20339E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39567== by 0x1FB7BF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39567== by 0x1FEF52: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39567== by 0x1FEE4D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39567== by 0x1FF461: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39567== by 0x1F9FB5: main (TestVolumeTrackingModifier.cpp:18) ==39567== ==39567== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39567== at 0xF8BBA8C: __open_nocancel (open64_nocancel.c:39) ==39567== by 0xF83FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39567== by 0xF1AD822: ??? ==39567== by 0xF1AD96F: ??? ==39567== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39567== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39567== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39567== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39567== by 0x101B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39567== by 0x1014AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39567== by 0x102F6D38: PetscInitialize (pinit.c:924) ==39567== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39567== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39567== by 0x20339E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39567== by 0x1FB7BF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39567== by 0x1FEF52: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39567== by 0x1FEE4D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39567== by 0x1FF461: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39567== by 0x1F9FB5: main (TestVolumeTrackingModifier.cpp:18) ==39567== ==39567== Open file descriptor 145: ==39567== ==39567== ==39567== Open file descriptor 142: ==39567== ==39567== ==39567== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVolumeTrackingModifier_valgrind.txt ==39567== ==39567== ==39567== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39567== ==39567== ==39567== ==39567== HEAP SUMMARY: ==39567== in use at exit: 618,366 bytes in 8,237 blocks ==39567== total heap usage: 11,631,028 allocs, 11,622,791 frees, 3,070,560,693 bytes allocated ==39567== ==39567== LEAK SUMMARY: ==39567== definitely lost: 0 bytes in 0 blocks ==39567== indirectly lost: 0 bytes in 0 blocks ==39567== possibly lost: 0 bytes in 0 blocks ==39567== still reachable: 72 bytes in 4 blocks ==39567== suppressed: 618,294 bytes in 8,233 blocks ==39567== Reachable blocks (those to which a pointer was found) are not shown. ==39567== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39567== ==39567== For lists of detected and suppressed errors, rerun with: -s ==39567== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)