==42613== Memcheck, a memory error detector ==42613== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42613== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42613== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestRushLarsen -malloc_debug -malloc_dump -memory_info ==42613== Parent PID: 24011 ==42613== ==42613== ==42613== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42613== Open file descriptor 12: ==42613== at 0x9C910ED: pipe (pipe.c:29) ==42613== by 0x1436407D: ??? ==42613== by 0xEE564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42613== by 0x98DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42613== by 0x9877D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42613== by 0x8209D38: PetscInitialize (pinit.c:924) ==42613== by 0x9783E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42613== by 0x9783EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42613== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42613== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42613== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42613== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42613== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42613== by 0x114C35: main (TestRushLarsen.cpp:18) ==42613== ==42613== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42613== at 0x9C95A8C: __open_nocancel (open64_nocancel.c:39) ==42613== by 0x9C19BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42613== by 0x97BB822: ??? ==42613== by 0x97BB96F: ??? ==42613== by 0xEEFB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42613== by 0xEEFB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42613== by 0xEEB1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42613== by 0xEE562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42613== by 0x98DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42613== by 0x9877D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42613== by 0x8209D38: PetscInitialize (pinit.c:924) ==42613== by 0x9783E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42613== by 0x9783EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42613== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42613== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42613== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42613== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42613== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42613== by 0x114C35: main (TestRushLarsen.cpp:18) ==42613== ==42613== Open file descriptor 145: ==42613== ==42613== ==42613== Open file descriptor 142: ==42613== ==42613== ==42613== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRushLarsen_valgrind.txt ==42613== ==42613== ==42613== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42613== ==42613== ==42613== ==42613== HEAP SUMMARY: ==42613== in use at exit: 621,885 bytes in 8,243 blocks ==42613== total heap usage: 1,051,909 allocs, 1,043,666 frees, 1,779,190,144 bytes allocated ==42613== ==42613== LEAK SUMMARY: ==42613== definitely lost: 0 bytes in 0 blocks ==42613== indirectly lost: 0 bytes in 0 blocks ==42613== possibly lost: 0 bytes in 0 blocks ==42613== still reachable: 3,575 bytes in 10 blocks ==42613== suppressed: 618,310 bytes in 8,233 blocks ==42613== Reachable blocks (those to which a pointer was found) are not shown. ==42613== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42613== ==42613== For lists of detected and suppressed errors, rerun with: -s ==42613== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)