==25609== Memcheck, a memory error detector ==25609== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25609== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25609== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticGrowingDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25609== Parent PID: 24069 ==25609== ==25609== ==25609== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25609== Open file descriptor 12: ==25609== at 0x110CC0ED: pipe (pipe.c:29) ==25609== by 0x1973107D: ??? ==25609== by 0x14CE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25609== by 0x10D19418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25609== by 0x10CB2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25609== by 0xF9A9D38: PetscInitialize (pinit.c:924) ==25609== by 0xF515E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25609== by 0xF515EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25609== by 0x12F3BB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25609== by 0x12A2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25609== by 0x12CDFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25609== by 0x12CC9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25609== by 0x12D333: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25609== by 0x1286D5: main (TestSimulationsWithEllipticGrowingDomainPdeModifier.cpp:19) ==25609== ==25609== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25609== at 0x110D0A8C: __open_nocancel (open64_nocancel.c:39) ==25609== by 0x11054BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25609== by 0xF54D822: ??? ==25609== by 0xF54D96F: ??? ==25609== by 0x14D886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25609== by 0x14D88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25609== by 0x14D3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25609== by 0x14CE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25609== by 0x10D19418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25609== by 0x10CB2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25609== by 0xF9A9D38: PetscInitialize (pinit.c:924) ==25609== by 0xF515E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25609== by 0xF515EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25609== by 0x12F3BB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25609== by 0x12A2AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25609== by 0x12CDFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25609== by 0x12CC9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25609== by 0x12D333: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25609== by 0x1286D5: main (TestSimulationsWithEllipticGrowingDomainPdeModifier.cpp:19) ==25609== ==25609== Open file descriptor 145: ==25609== ==25609== ==25609== Open file descriptor 142: ==25609== ==25609== ==25609== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticGrowingDomainPdeModifier_valgrind.txt ==25609== ==25609== ==25609== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25609== ==25609== ==25609== ==25609== HEAP SUMMARY: ==25609== in use at exit: 618,350 bytes in 8,236 blocks ==25609== total heap usage: 5,221,977 allocs, 5,213,741 frees, 2,325,905,503 bytes allocated ==25609== ==25609== LEAK SUMMARY: ==25609== definitely lost: 0 bytes in 0 blocks ==25609== indirectly lost: 0 bytes in 0 blocks ==25609== possibly lost: 0 bytes in 0 blocks ==25609== still reachable: 56 bytes in 3 blocks ==25609== suppressed: 618,294 bytes in 8,233 blocks ==25609== Reachable blocks (those to which a pointer was found) are not shown. ==25609== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25609== ==25609== For lists of detected and suppressed errors, rerun with: -s ==25609== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 32 from 32)