==41759== Memcheck, a memory error detector ==41759== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41759== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41759== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayGenerator -malloc_debug -malloc_dump -memory_info ==41759== Parent PID: 24649 ==41759== ==41759== ==41759== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41759== Open file descriptor 12: ==41759== at 0x6BE20ED: pipe (pipe.c:29) ==41759== by 0x107C607D: ??? ==41759== by 0xBAE64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41759== by 0x5EE7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41759== by 0x5E80D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41759== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==41759== by 0x5DA6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41759== by 0x5DA6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41759== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41759== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41759== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41759== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41759== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41759== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==41759== ==41759== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41759== at 0x6BE6A8C: __open_nocancel (open64_nocancel.c:39) ==41759== by 0x6B6ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41759== by 0x5DDE822: ??? ==41759== by 0x5DDE96F: ??? ==41759== by 0xBB8B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41759== by 0xBB8B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41759== by 0xBB41922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41759== by 0xBAE62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41759== by 0x5EE7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41759== by 0x5E80D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41759== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==41759== by 0x5DA6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41759== by 0x5DA6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41759== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41759== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41759== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41759== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41759== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41759== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==41759== ==41759== Open file descriptor 145: ==41759== ==41759== ==41759== Open file descriptor 142: ==41759== ==41759== ==41759== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayGenerator_valgrind.txt ==41759== ==41759== ==41759== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41759== ==41759== ==41759== ==41759== HEAP SUMMARY: ==41759== in use at exit: 638,026 bytes in 8,477 blocks ==41759== total heap usage: 627,795 allocs, 619,318 frees, 1,788,564,686 bytes allocated ==41759== ==41759== LEAK SUMMARY: ==41759== definitely lost: 0 bytes in 0 blocks ==41759== indirectly lost: 0 bytes in 0 blocks ==41759== possibly lost: 0 bytes in 0 blocks ==41759== still reachable: 24 bytes in 2 blocks ==41759== suppressed: 638,002 bytes in 8,475 blocks ==41759== Reachable blocks (those to which a pointer was found) are not shown. ==41759== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41759== ==41759== For lists of detected and suppressed errors, rerun with: -s ==41759== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)