==41858== Memcheck, a memory error detector ==41858== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41858== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41858== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41858== Parent PID: 24649 ==41858== ==41858== ==41858== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41858== Open file descriptor 12: ==41858== at 0xC1200ED: pipe (pipe.c:29) ==41858== by 0x1436207D: ??? ==41858== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41858== by 0xBA28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41858== by 0xB9C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41858== by 0x8270D38: PetscInitialize (pinit.c:924) ==41858== by 0xB8F0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41858== by 0xB8F0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41858== by 0x140886: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41858== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41858== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41858== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41858== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41858== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41858== ==41858== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41858== at 0xC124A8C: __open_nocancel (open64_nocancel.c:39) ==41858== by 0xC0A8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41858== by 0x8115822: ??? ==41858== by 0x811596F: ??? ==41858== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41858== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41858== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41858== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41858== by 0xBA28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41858== by 0xB9C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41858== by 0x8270D38: PetscInitialize (pinit.c:924) ==41858== by 0xB8F0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41858== by 0xB8F0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41858== by 0x140886: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41858== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41858== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41858== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41858== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41858== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41858== ==41858== Open file descriptor 145: ==41858== ==41858== ==41858== Open file descriptor 142: ==41858== ==41858== ==41858== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41858== ==41858== ==41858== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41858== ==41858== ==41858== ==41858== HEAP SUMMARY: ==41858== in use at exit: 638,522 bytes in 8,487 blocks ==41858== total heap usage: 585,479 allocs, 576,992 frees, 1,550,488,202 bytes allocated ==41858== ==41858== LEAK SUMMARY: ==41858== definitely lost: 0 bytes in 0 blocks ==41858== indirectly lost: 0 bytes in 0 blocks ==41858== possibly lost: 0 bytes in 0 blocks ==41858== still reachable: 24 bytes in 2 blocks ==41858== suppressed: 638,498 bytes in 8,485 blocks ==41858== Reachable blocks (those to which a pointer was found) are not shown. ==41858== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41858== ==41858== For lists of detected and suppressed errors, rerun with: -s ==41858== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)