==26647== Memcheck, a memory error detector ==26647== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26647== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26647== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationCountWriters -malloc_debug -malloc_dump -memory_info ==26647== Parent PID: 24649 ==26647== ==26647== ==26647== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26647== Open file descriptor 12: ==26647== at 0xF8BA0ED: pipe (pipe.c:29) ==26647== by 0x1973307D: ??? ==26647== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26647== by 0x101B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26647== by 0x1014DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26647== by 0x102F9D38: PetscInitialize (pinit.c:924) ==26647== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26647== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26647== by 0x137BD8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26647== by 0x130FA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26647== by 0x133996: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26647== by 0x133891: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26647== by 0x133EA5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26647== by 0x12F7A5: main (TestCellPopulationCountWriters.cpp:18) ==26647== ==26647== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26647== at 0xF8BEA8C: __open_nocancel (open64_nocancel.c:39) ==26647== by 0xF842BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26647== by 0xF1B0822: ??? ==26647== by 0xF1B096F: ??? ==26647== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26647== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26647== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26647== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26647== by 0x101B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26647== by 0x1014DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26647== by 0x102F9D38: PetscInitialize (pinit.c:924) ==26647== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26647== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26647== by 0x137BD8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26647== by 0x130FA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26647== by 0x133996: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26647== by 0x133891: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26647== by 0x133EA5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26647== by 0x12F7A5: main (TestCellPopulationCountWriters.cpp:18) ==26647== ==26647== Open file descriptor 145: ==26647== ==26647== ==26647== Open file descriptor 142: ==26647== ==26647== ==26647== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationCountWriters_valgrind.txt ==26647== ==26647== ==26647== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26647== ==26647== ==26647== ==26647== HEAP SUMMARY: ==26647== in use at exit: 638,058 bytes in 8,478 blocks ==26647== total heap usage: 58,365 allocs, 49,887 frees, 1,347,612,885 bytes allocated ==26647== ==26647== LEAK SUMMARY: ==26647== definitely lost: 0 bytes in 0 blocks ==26647== indirectly lost: 0 bytes in 0 blocks ==26647== possibly lost: 0 bytes in 0 blocks ==26647== still reachable: 56 bytes in 3 blocks ==26647== suppressed: 638,002 bytes in 8,475 blocks ==26647== Reachable blocks (those to which a pointer was found) are not shown. ==26647== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26647== ==26647== For lists of detected and suppressed errors, rerun with: -s ==26647== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)