==41943== Memcheck, a memory error detector ==41943== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41943== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41943== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestFibreReaderAbilityExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==41943== Parent PID: 24649 ==41943== ==41943== ==41943== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41943== Open file descriptor 12: ==41943== at 0xA8170ED: pipe (pipe.c:29) ==41943== by 0x1436107D: ??? ==41943== by 0xD5F64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41943== by 0xABE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41943== by 0xAB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41943== by 0xB0C0D38: PetscInitialize (pinit.c:924) ==41943== by 0xA0FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41943== by 0xA0FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41943== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41943== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41943== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41943== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41943== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41943== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==41943== ==41943== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41943== at 0xA81BA8C: __open_nocancel (open64_nocancel.c:39) ==41943== by 0xA79FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41943== by 0xA133822: ??? ==41943== by 0xA13396F: ??? ==41943== by 0xD69B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41943== by 0xD69B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41943== by 0xD651922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41943== by 0xD5F62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41943== by 0xABE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41943== by 0xAB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41943== by 0xB0C0D38: PetscInitialize (pinit.c:924) ==41943== by 0xA0FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41943== by 0xA0FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41943== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41943== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41943== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41943== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41943== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41943== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==41943== ==41943== Open file descriptor 145: ==41943== ==41943== ==41943== Open file descriptor 142: ==41943== ==41943== ==41943== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestFibreReaderAbilityExtendedBidomainProblem_valgrind.txt ==41943== ==41943== ==41943== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41943== ==41943== ==41943== ==41943== HEAP SUMMARY: ==41943== in use at exit: 638,042 bytes in 8,477 blocks ==41943== total heap usage: 116,423 allocs, 107,946 frees, 1,344,462,596 bytes allocated ==41943== ==41943== LEAK SUMMARY: ==41943== definitely lost: 0 bytes in 0 blocks ==41943== indirectly lost: 0 bytes in 0 blocks ==41943== possibly lost: 0 bytes in 0 blocks ==41943== still reachable: 24 bytes in 2 blocks ==41943== suppressed: 638,018 bytes in 8,475 blocks ==41943== Reachable blocks (those to which a pointer was found) are not shown. ==41943== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41943== ==41943== For lists of detected and suppressed errors, rerun with: -s ==41943== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)