==42387== Memcheck, a memory error detector ==42387== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42387== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42387== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==42387== Parent PID: 24649 ==42387== ==42387== ==42387== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42387== Open file descriptor 12: ==42387== at 0x87DA0ED: pipe (pipe.c:29) ==42387== by 0x1436207D: ??? ==42387== by 0xC8D64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42387== by 0x8BA8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42387== by 0x8B41D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42387== by 0x9083D38: PetscInitialize (pinit.c:924) ==42387== by 0x8405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42387== by 0x8405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42387== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42387== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42387== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42387== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42387== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42387== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==42387== ==42387== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42387== at 0x87DEA8C: __open_nocancel (open64_nocancel.c:39) ==42387== by 0x8762BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42387== by 0x843D822: ??? ==42387== by 0x843D96F: ??? ==42387== by 0xC97B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42387== by 0xC97B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42387== by 0xC931922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42387== by 0xC8D62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42387== by 0x8BA8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42387== by 0x8B41D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42387== by 0x9083D38: PetscInitialize (pinit.c:924) ==42387== by 0x8405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42387== by 0x8405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42387== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42387== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42387== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42387== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42387== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42387== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==42387== ==42387== Open file descriptor 145: ==42387== ==42387== ==42387== Open file descriptor 142: ==42387== ==42387== ==42387== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==42387== ==42387== ==42387== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42387== ==42387== ==42387== ==42387== HEAP SUMMARY: ==42387== in use at exit: 641,574 bytes in 8,481 blocks ==42387== total heap usage: 3,054,765 allocs, 3,046,284 frees, 1,614,223,171 bytes allocated ==42387== ==42387== LEAK SUMMARY: ==42387== definitely lost: 0 bytes in 0 blocks ==42387== indirectly lost: 0 bytes in 0 blocks ==42387== possibly lost: 0 bytes in 0 blocks ==42387== still reachable: 3,629 bytes in 10 blocks ==42387== suppressed: 637,945 bytes in 8,471 blocks ==42387== Reachable blocks (those to which a pointer was found) are not shown. ==42387== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42387== ==42387== For lists of detected and suppressed errors, rerun with: -s ==42387== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)