==44193== Memcheck, a memory error detector ==44193== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==44193== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==44193== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==44193== Parent PID: 24649 ==44193== ==44193== ==44193== FILE DESCRIPTORS: 9 open (3 std) at exit. ==44193== Open file descriptor 12: ==44193== at 0xA8E30ED: pipe (pipe.c:29) ==44193== by 0x1436207D: ??? ==44193== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44193== by 0xACAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44193== by 0xAC48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44193== by 0xB18CD38: PetscInitialize (pinit.c:924) ==44193== by 0xA1C7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44193== by 0xA1C7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44193== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44193== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44193== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44193== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44193== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44193== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==44193== ==44193== Open file descriptor 8: /dev/shm/open_mpi.0000 ==44193== at 0xA8E7A8C: __open_nocancel (open64_nocancel.c:39) ==44193== by 0xA86BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==44193== by 0xA1FF822: ??? ==44193== by 0xA1FF96F: ??? ==44193== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44193== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44193== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44193== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44193== by 0xACAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44193== by 0xAC48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44193== by 0xB18CD38: PetscInitialize (pinit.c:924) ==44193== by 0xA1C7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44193== by 0xA1C7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44193== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44193== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44193== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44193== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44193== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44193== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==44193== ==44193== Open file descriptor 145: ==44193== ==44193== ==44193== Open file descriptor 142: ==44193== ==44193== ==44193== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==44193== ==44193== ==44193== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==44193== ==44193== ==44193== ==44193== HEAP SUMMARY: ==44193== in use at exit: 638,042 bytes in 8,477 blocks ==44193== total heap usage: 120,815 allocs, 112,338 frees, 1,367,700,483 bytes allocated ==44193== ==44193== LEAK SUMMARY: ==44193== definitely lost: 0 bytes in 0 blocks ==44193== indirectly lost: 0 bytes in 0 blocks ==44193== possibly lost: 0 bytes in 0 blocks ==44193== still reachable: 24 bytes in 2 blocks ==44193== suppressed: 638,018 bytes in 8,475 blocks ==44193== Reachable blocks (those to which a pointer was found) are not shown. ==44193== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==44193== ==44193== For lists of detected and suppressed errors, rerun with: -s ==44193== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)