==42394== Memcheck, a memory error detector ==42394== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42394== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42394== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==42394== Parent PID: 24649 ==42394== ==42394== ==42394== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42394== Open file descriptor 12: ==42394== at 0x85980ED: pipe (pipe.c:29) ==42394== by 0x1436207D: ??? ==42394== by 0xC8D64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42394== by 0x8966418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42394== by 0x88FFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42394== by 0x8E41D38: PetscInitialize (pinit.c:924) ==42394== by 0x81C1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42394== by 0x81C1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42394== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42394== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42394== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42394== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42394== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42394== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42394== ==42394== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42394== at 0x859CA8C: __open_nocancel (open64_nocancel.c:39) ==42394== by 0x8520BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42394== by 0x81F9822: ??? ==42394== by 0x81F996F: ??? ==42394== by 0xC97B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42394== by 0xC97B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42394== by 0xC931922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42394== by 0xC8D62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42394== by 0x8966418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42394== by 0x88FFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42394== by 0x8E41D38: PetscInitialize (pinit.c:924) ==42394== by 0x81C1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42394== by 0x81C1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42394== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42394== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42394== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42394== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42394== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42394== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42394== ==42394== Open file descriptor 145: ==42394== ==42394== ==42394== Open file descriptor 142: ==42394== ==42394== ==42394== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==42394== ==42394== ==42394== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42394== ==42394== ==42394== ==42394== HEAP SUMMARY: ==42394== in use at exit: 638,042 bytes in 8,477 blocks ==42394== total heap usage: 49,547 allocs, 41,070 frees, 1,340,037,823 bytes allocated ==42394== ==42394== LEAK SUMMARY: ==42394== definitely lost: 0 bytes in 0 blocks ==42394== indirectly lost: 0 bytes in 0 blocks ==42394== possibly lost: 0 bytes in 0 blocks ==42394== still reachable: 24 bytes in 2 blocks ==42394== suppressed: 638,018 bytes in 8,475 blocks ==42394== Reachable blocks (those to which a pointer was found) are not shown. ==42394== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42394== ==42394== For lists of detected and suppressed errors, rerun with: -s ==42394== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)