==25373== Memcheck, a memory error detector ==25373== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25373== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25373== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestMutableVertexMesh -malloc_debug -malloc_dump -memory_info ==25373== Parent PID: 24649 ==25373== ==25373== ==25373== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25373== Open file descriptor 12: ==25373== at 0x81680ED: pipe (pipe.c:29) ==25373== by 0x100E807D: ??? ==25373== by 0xBA6A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25373== by 0x7DB7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25373== by 0x7D50D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25373== by 0x6A47D38: PetscInitialize (pinit.c:924) ==25373== by 0x656FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25373== by 0x656FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25373== by 0x1B5183: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25373== by 0x1AE9FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25373== by 0x1B2836: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25373== by 0x1B26D6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25373== by 0x1B2D6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25373== by 0x1ACE25: main (TestMutableVertexMesh.cpp:19) ==25373== ==25373== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25373== at 0x816CA8C: __open_nocancel (open64_nocancel.c:39) ==25373== by 0x80F0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25373== by 0x65A7822: ??? ==25373== by 0x65A796F: ??? ==25373== by 0xBB116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25373== by 0xBB11938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25373== by 0xBAC7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25373== by 0xBA6A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25373== by 0x7DB7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25373== by 0x7D50D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25373== by 0x6A47D38: PetscInitialize (pinit.c:924) ==25373== by 0x656FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25373== by 0x656FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25373== by 0x1B5183: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25373== by 0x1AE9FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25373== by 0x1B2836: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25373== by 0x1B26D6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25373== by 0x1B2D6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25373== by 0x1ACE25: main (TestMutableVertexMesh.cpp:19) ==25373== ==25373== Open file descriptor 145: ==25373== ==25373== ==25373== Open file descriptor 142: ==25373== ==25373== ==25373== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMesh_valgrind.txt ==25373== ==25373== ==25373== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25373== ==25373== ==25373== ==25373== HEAP SUMMARY: ==25373== in use at exit: 640,482 bytes in 8,478 blocks ==25373== total heap usage: 59,264 allocs, 50,786 frees, 1,341,165,629 bytes allocated ==25373== ==25373== LEAK SUMMARY: ==25373== definitely lost: 0 bytes in 0 blocks ==25373== indirectly lost: 0 bytes in 0 blocks ==25373== possibly lost: 0 bytes in 0 blocks ==25373== still reachable: 2,576 bytes in 3 blocks ==25373== suppressed: 637,906 bytes in 8,475 blocks ==25373== Reachable blocks (those to which a pointer was found) are not shown. ==25373== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25373== ==25373== For lists of detected and suppressed errors, rerun with: -s ==25373== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)