==26830== Memcheck, a memory error detector ==26830== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26830== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26830== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==26830== Parent PID: 24649 ==26830== ==26830== ==26830== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26830== Open file descriptor 12: ==26830== at 0xF95F0ED: pipe (pipe.c:29) ==26830== by 0x1973107D: ??? ==26830== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26830== by 0x10259418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26830== by 0x101F2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26830== by 0x103E0D38: PetscInitialize (pinit.c:924) ==26830== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26830== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26830== by 0x13F4FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26830== by 0x13824D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26830== by 0x13AF0A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26830== by 0x13ADAA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26830== by 0x13B441: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26830== by 0x136675: main (TestNodeBasedCellPopulationParallelMethods.cpp:19) ==26830== ==26830== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26830== at 0xF963A8C: __open_nocancel (open64_nocancel.c:39) ==26830== by 0xF8E7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26830== by 0xF1B0822: ??? ==26830== by 0xF1B096F: ??? ==26830== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26830== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26830== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26830== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26830== by 0x10259418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26830== by 0x101F2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26830== by 0x103E0D38: PetscInitialize (pinit.c:924) ==26830== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26830== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26830== by 0x13F4FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26830== by 0x13824D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26830== by 0x13AF0A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26830== by 0x13ADAA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26830== by 0x13B441: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26830== by 0x136675: main (TestNodeBasedCellPopulationParallelMethods.cpp:19) ==26830== ==26830== Open file descriptor 145: ==26830== ==26830== ==26830== Open file descriptor 142: ==26830== ==26830== ==26830== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationParallelMethods_valgrind.txt ==26830== ==26830== ==26830== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26830== ==26830== ==26830== ==26830== HEAP SUMMARY: ==26830== in use at exit: 638,058 bytes in 8,478 blocks ==26830== total heap usage: 65,701 allocs, 57,223 frees, 1,344,175,915 bytes allocated ==26830== ==26830== LEAK SUMMARY: ==26830== definitely lost: 0 bytes in 0 blocks ==26830== indirectly lost: 0 bytes in 0 blocks ==26830== possibly lost: 0 bytes in 0 blocks ==26830== still reachable: 56 bytes in 3 blocks ==26830== suppressed: 638,002 bytes in 8,475 blocks ==26830== Reachable blocks (those to which a pointer was found) are not shown. ==26830== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26830== ==26830== For lists of detected and suppressed errors, rerun with: -s ==26830== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)