==41177== Memcheck, a memory error detector ==41177== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41177== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41177== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==41177== Parent PID: 24649 ==41177== ==41177== ==41177== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41177== Open file descriptor 12: ==41177== at 0x126D60ED: pipe (pipe.c:29) ==41177== by 0x1B3F207D: ??? ==41177== by 0x165DF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41177== by 0x11EF7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41177== by 0x11E90D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41177== by 0x6210D38: PetscInitialize (pinit.c:924) ==41177== by 0x11DB6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41177== by 0x11DB6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41177== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41177== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41177== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41177== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41177== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41177== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==41177== ==41177== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41177== at 0x126DAA8C: __open_nocancel (open64_nocancel.c:39) ==41177== by 0x1265EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41177== by 0x11DEE822: ??? ==41177== by 0x11DEE96F: ??? ==41177== by 0x166846DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41177== by 0x16684938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41177== by 0x1663A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41177== by 0x165DF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41177== by 0x11EF7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41177== by 0x11E90D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41177== by 0x6210D38: PetscInitialize (pinit.c:924) ==41177== by 0x11DB6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41177== by 0x11DB6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41177== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41177== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41177== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41177== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41177== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41177== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==41177== ==41177== Open file descriptor 145: ==41177== ==41177== ==41177== Open file descriptor 142: ==41177== ==41177== ==41177== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==41177== ==41177== ==41177== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41177== ==41177== ==41177== ==41177== HEAP SUMMARY: ==41177== in use at exit: 638,074 bytes in 8,478 blocks ==41177== total heap usage: 1,406,024 allocs, 1,397,546 frees, 1,456,959,152 bytes allocated ==41177== ==41177== LEAK SUMMARY: ==41177== definitely lost: 0 bytes in 0 blocks ==41177== indirectly lost: 0 bytes in 0 blocks ==41177== possibly lost: 0 bytes in 0 blocks ==41177== still reachable: 56 bytes in 3 blocks ==41177== suppressed: 638,018 bytes in 8,475 blocks ==41177== Reachable blocks (those to which a pointer was found) are not shown. ==41177== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41177== ==41177== For lists of detected and suppressed errors, rerun with: -s ==41177== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)