==27267== Memcheck, a memory error detector ==27267== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27267== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27267== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==27267== Parent PID: 24649 ==27267== ==27267== ==27267== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27267== Open file descriptor 12: ==27267== at 0xF95F0ED: pipe (pipe.c:29) ==27267== by 0x1973107D: ??? ==27267== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27267== by 0x10259418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27267== by 0x101F2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27267== by 0x103E0D38: PetscInitialize (pinit.c:924) ==27267== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27267== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27267== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27267== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27267== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27267== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27267== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27267== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==27267== ==27267== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27267== at 0xF963A8C: __open_nocancel (open64_nocancel.c:39) ==27267== by 0xF8E7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27267== by 0xF1B0822: ??? ==27267== by 0xF1B096F: ??? ==27267== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27267== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27267== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27267== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27267== by 0x10259418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27267== by 0x101F2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27267== by 0x103E0D38: PetscInitialize (pinit.c:924) ==27267== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27267== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27267== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27267== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27267== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27267== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27267== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27267== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==27267== ==27267== Open file descriptor 145: ==27267== ==27267== ==27267== Open file descriptor 142: ==27267== ==27267== ==27267== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==27267== ==27267== ==27267== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27267== ==27267== ==27267== ==27267== HEAP SUMMARY: ==27267== in use at exit: 637,985 bytes in 8,474 blocks ==27267== total heap usage: 3,737,401 allocs, 3,728,927 frees, 4,488,661,485 bytes allocated ==27267== ==27267== LEAK SUMMARY: ==27267== definitely lost: 0 bytes in 0 blocks ==27267== indirectly lost: 0 bytes in 0 blocks ==27267== possibly lost: 0 bytes in 0 blocks ==27267== still reachable: 56 bytes in 3 blocks ==27267== suppressed: 637,929 bytes in 8,471 blocks ==27267== Reachable blocks (those to which a pointer was found) are not shown. ==27267== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27267== ==27267== For lists of detected and suppressed errors, rerun with: -s ==27267== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)