==26871== Memcheck, a memory error detector ==26871== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26871== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26871== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26871== Parent PID: 24649 ==26871== ==26871== ==26871== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26871== Open file descriptor 12: ==26871== at 0xF10A0ED: pipe (pipe.c:29) ==26871== by 0x1973007D: ??? ==26871== by 0x13CCC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26871== by 0xED57418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26871== by 0xECF0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26871== by 0xD9E7D38: PetscInitialize (pinit.c:924) ==26871== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26871== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26871== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26871== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26871== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26871== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26871== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26871== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26871== ==26871== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26871== at 0xF10EA8C: __open_nocancel (open64_nocancel.c:39) ==26871== by 0xF092BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26871== by 0xD547822: ??? ==26871== by 0xD54796F: ??? ==26871== by 0x13D716DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26871== by 0x13D71938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26871== by 0x13D27922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26871== by 0x13CCC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26871== by 0xED57418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26871== by 0xECF0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26871== by 0xD9E7D38: PetscInitialize (pinit.c:924) ==26871== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26871== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26871== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26871== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26871== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26871== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26871== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26871== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26871== ==26871== Open file descriptor 145: ==26871== ==26871== ==26871== Open file descriptor 142: ==26871== ==26871== ==26871== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26871== ==26871== ==26871== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26871== ==26871== ==26871== ==26871== HEAP SUMMARY: ==26871== in use at exit: 638,058 bytes in 8,478 blocks ==26871== total heap usage: 68,048 allocs, 59,570 frees, 1,341,485,346 bytes allocated ==26871== ==26871== LEAK SUMMARY: ==26871== definitely lost: 0 bytes in 0 blocks ==26871== indirectly lost: 0 bytes in 0 blocks ==26871== possibly lost: 0 bytes in 0 blocks ==26871== still reachable: 56 bytes in 3 blocks ==26871== suppressed: 638,002 bytes in 8,475 blocks ==26871== Reachable blocks (those to which a pointer was found) are not shown. ==26871== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26871== ==26871== For lists of detected and suppressed errors, rerun with: -s ==26871== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)