==41042== Memcheck, a memory error detector ==41042== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41042== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41042== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSingleOdeWntCellCycleModel -malloc_debug -malloc_dump -memory_info ==41042== Parent PID: 24649 ==41042== ==41042== ==41042== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41042== Open file descriptor 12: ==41042== at 0x109CA0ED: pipe (pipe.c:29) ==41042== by 0x1B3F207D: ??? ==41042== by 0x1553F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41042== by 0x102D2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41042== by 0x1026BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41042== by 0x6277D38: PetscInitialize (pinit.c:924) ==41042== by 0x101B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41042== by 0x101B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41042== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41042== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41042== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41042== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41042== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41042== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==41042== ==41042== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41042== at 0x109CEA8C: __open_nocancel (open64_nocancel.c:39) ==41042== by 0x10952BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41042== by 0x611C822: ??? ==41042== by 0x611C96F: ??? ==41042== by 0x155E46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41042== by 0x155E4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41042== by 0x1559A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41042== by 0x1553F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41042== by 0x102D2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41042== by 0x1026BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41042== by 0x6277D38: PetscInitialize (pinit.c:924) ==41042== by 0x101B4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41042== by 0x101B4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41042== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41042== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41042== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41042== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41042== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41042== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==41042== ==41042== Open file descriptor 145: ==41042== ==41042== ==41042== Open file descriptor 142: ==41042== ==41042== ==41042== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSingleOdeWntCellCycleModel_valgrind.txt ==41042== ==41042== ==41042== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41042== ==41042== ==41042== ==41042== HEAP SUMMARY: ==41042== in use at exit: 638,218 bytes in 8,480 blocks ==41042== total heap usage: 263,606 allocs, 255,126 frees, 1,358,796,716 bytes allocated ==41042== ==41042== LEAK SUMMARY: ==41042== definitely lost: 0 bytes in 0 blocks ==41042== indirectly lost: 0 bytes in 0 blocks ==41042== possibly lost: 0 bytes in 0 blocks ==41042== still reachable: 200 bytes in 5 blocks ==41042== suppressed: 638,018 bytes in 8,475 blocks ==41042== Reachable blocks (those to which a pointer was found) are not shown. ==41042== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41042== ==41042== For lists of detected and suppressed errors, rerun with: -s ==41042== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)