==41065== Memcheck, a memory error detector ==41065== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41065== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41065== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==41065== Parent PID: 24649 ==41065== ==41065== ==41065== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41065== Open file descriptor 12: ==41065== at 0x111380ED: pipe (pipe.c:29) ==41065== by 0x1B3F107D: ??? ==41065== by 0x144324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41065== by 0x11B5B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41065== by 0x11AF4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41065== by 0x11CA0D38: PetscInitialize (pinit.c:924) ==41065== by 0x10A38E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41065== by 0x10A38EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41065== by 0x126BFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41065== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41065== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41065== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41065== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41065== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==41065== ==41065== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41065== at 0x1113CA8C: __open_nocancel (open64_nocancel.c:39) ==41065== by 0x110C0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41065== by 0x10A70822: ??? ==41065== by 0x10A7096F: ??? ==41065== by 0x144D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41065== by 0x144D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41065== by 0x1448D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41065== by 0x144322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41065== by 0x11B5B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41065== by 0x11AF4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41065== by 0x11CA0D38: PetscInitialize (pinit.c:924) ==41065== by 0x10A38E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41065== by 0x10A38EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41065== by 0x126BFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41065== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41065== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41065== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41065== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41065== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==41065== ==41065== Open file descriptor 145: ==41065== ==41065== ==41065== Open file descriptor 142: ==41065== ==41065== ==41065== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==41065== ==41065== ==41065== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41065== ==41065== ==41065== ==41065== HEAP SUMMARY: ==41065== in use at exit: 638,074 bytes in 8,478 blocks ==41065== total heap usage: 57,029 allocs, 48,551 frees, 1,340,682,884 bytes allocated ==41065== ==41065== LEAK SUMMARY: ==41065== definitely lost: 0 bytes in 0 blocks ==41065== indirectly lost: 0 bytes in 0 blocks ==41065== possibly lost: 0 bytes in 0 blocks ==41065== still reachable: 56 bytes in 3 blocks ==41065== suppressed: 638,018 bytes in 8,475 blocks ==41065== Reachable blocks (those to which a pointer was found) are not shown. ==41065== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41065== ==41065== For lists of detected and suppressed errors, rerun with: -s ==41065== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)