==25569== Memcheck, a memory error detector ==25569== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25569== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25569== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25569== Parent PID: 24025 ==25569== ==25569== ==25569== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25569== Open file descriptor 12: ==25569== at 0x110CC0ED: pipe (pipe.c:29) ==25569== by 0x1973107D: ??? ==25569== by 0x14CE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25569== by 0x10D19418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25569== by 0x10CB2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25569== by 0xF9A9D38: PetscInitialize (pinit.c:924) ==25569== by 0xF515E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25569== by 0xF515EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25569== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25569== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25569== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25569== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25569== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25569== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25569== ==25569== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25569== at 0x110D0A8C: __open_nocancel (open64_nocancel.c:39) ==25569== by 0x11054BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25569== by 0xF54D822: ??? ==25569== by 0xF54D96F: ??? ==25569== by 0x14D886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25569== by 0x14D88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25569== by 0x14D3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25569== by 0x14CE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25569== by 0x10D19418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25569== by 0x10CB2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25569== by 0xF9A9D38: PetscInitialize (pinit.c:924) ==25569== by 0xF515E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25569== by 0xF515EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25569== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25569== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25569== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25569== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25569== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25569== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25569== ==25569== Open file descriptor 145: ==25569== ==25569== ==25569== Open file descriptor 142: ==25569== ==25569== ==25569== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==25569== ==25569== ==25569== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25569== ==25569== ==25569== ==25569== HEAP SUMMARY: ==25569== in use at exit: 618,350 bytes in 8,236 blocks ==25569== total heap usage: 7,866,187 allocs, 7,857,951 frees, 2,189,205,179 bytes allocated ==25569== ==25569== LEAK SUMMARY: ==25569== definitely lost: 0 bytes in 0 blocks ==25569== indirectly lost: 0 bytes in 0 blocks ==25569== possibly lost: 0 bytes in 0 blocks ==25569== still reachable: 56 bytes in 3 blocks ==25569== suppressed: 618,294 bytes in 8,233 blocks ==25569== Reachable blocks (those to which a pointer was found) are not shown. ==25569== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25569== ==25569== For lists of detected and suppressed errors, rerun with: -s ==25569== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)