==26595== Memcheck, a memory error detector ==26595== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26595== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26595== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26595== Parent PID: 24729 ==26595== ==26595== ==26595== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26595== Open file descriptor 12: ==26595== at 0xF8BA0ED: pipe (pipe.c:29) ==26595== by 0x1973307D: ??? ==26595== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26595== by 0x101B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26595== by 0x1014DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26595== by 0x102F9D38: PetscInitialize (pinit.c:924) ==26595== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26595== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26595== by 0x1655AC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26595== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26595== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26595== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26595== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26595== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==26595== ==26595== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26595== at 0xF8BEA8C: __open_nocancel (open64_nocancel.c:39) ==26595== by 0xF842BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26595== by 0xF1B0822: ??? ==26595== by 0xF1B096F: ??? ==26595== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26595== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26595== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26595== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26595== by 0x101B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26595== by 0x1014DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26595== by 0x102F9D38: PetscInitialize (pinit.c:924) ==26595== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26595== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26595== by 0x1655AC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26595== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26595== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26595== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26595== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26595== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==26595== ==26595== Open file descriptor 145: ==26595== ==26595== ==26595== Open file descriptor 142: ==26595== ==26595== ==26595== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==26595== ==26595== ==26595== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26595== ==26595== ==26595== ==26595== HEAP SUMMARY: ==26595== in use at exit: 618,423 bytes in 8,240 blocks ==26595== total heap usage: 75,853 allocs, 67,613 frees, 1,347,716,377 bytes allocated ==26595== ==26595== LEAK SUMMARY: ==26595== definitely lost: 0 bytes in 0 blocks ==26595== indirectly lost: 0 bytes in 0 blocks ==26595== possibly lost: 0 bytes in 0 blocks ==26595== still reachable: 56 bytes in 3 blocks ==26595== suppressed: 618,367 bytes in 8,237 blocks ==26595== Reachable blocks (those to which a pointer was found) are not shown. ==26595== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26595== ==26595== For lists of detected and suppressed errors, rerun with: -s ==26595== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)