==25045== Memcheck, a memory error detector ==25045== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25045== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25045== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==25045== Parent PID: 24729 ==25045== ==25045== ==25045== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25045== Open file descriptor 12: ==25045== at 0x61ED0ED: pipe (pipe.c:29) ==25045== by 0xAF2E07D: ??? ==25045== by 0x8A404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25045== by 0x5E3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25045== by 0x5DD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25045== by 0x49C3D38: PetscInitialize (pinit.c:924) ==25045== by 0x5CF9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25045== by 0x5CF9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25045== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25045== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25045== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25045== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25045== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25045== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==25045== ==25045== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25045== at 0x61F1A8C: __open_nocancel (open64_nocancel.c:39) ==25045== by 0x6175BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25045== by 0x5D31822: ??? ==25045== by 0x5D3196F: ??? ==25045== by 0x8AE76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25045== by 0x8AE7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25045== by 0x8A9D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25045== by 0x8A402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25045== by 0x5E3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25045== by 0x5DD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25045== by 0x49C3D38: PetscInitialize (pinit.c:924) ==25045== by 0x5CF9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25045== by 0x5CF9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25045== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25045== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25045== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25045== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25045== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25045== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==25045== ==25045== Open file descriptor 145: ==25045== ==25045== ==25045== Open file descriptor 142: ==25045== ==25045== ==25045== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==25045== ==25045== ==25045== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25045== ==25045== ==25045== ==25045== HEAP SUMMARY: ==25045== in use at exit: 617,927 bytes in 8,239 blocks ==25045== total heap usage: 61,723 allocs, 53,484 frees, 1,341,513,334 bytes allocated ==25045== ==25045== LEAK SUMMARY: ==25045== definitely lost: 0 bytes in 0 blocks ==25045== indirectly lost: 0 bytes in 0 blocks ==25045== possibly lost: 0 bytes in 0 blocks ==25045== still reachable: 24 bytes in 2 blocks ==25045== suppressed: 617,903 bytes in 8,237 blocks ==25045== Reachable blocks (those to which a pointer was found) are not shown. ==25045== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25045== ==25045== For lists of detected and suppressed errors, rerun with: -s ==25045== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)