==44058== Memcheck, a memory error detector ==44058== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==44058== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==44058== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==44058== Parent PID: 24729 ==44058== ==44058== ==44058== FILE DESCRIPTORS: 9 open (3 std) at exit. ==44058== Open file descriptor 12: ==44058== at 0xA8E30ED: pipe (pipe.c:29) ==44058== by 0x1436207D: ??? ==44058== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44058== by 0xACAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44058== by 0xAC48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44058== by 0xB18CD38: PetscInitialize (pinit.c:924) ==44058== by 0xA1C7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44058== by 0xA1C7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44058== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44058== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44058== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44058== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44058== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44058== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==44058== ==44058== Open file descriptor 8: /dev/shm/open_mpi.0000 ==44058== at 0xA8E7A8C: __open_nocancel (open64_nocancel.c:39) ==44058== by 0xA86BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==44058== by 0xA1FF822: ??? ==44058== by 0xA1FF96F: ??? ==44058== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44058== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44058== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==44058== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==44058== by 0xACAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44058== by 0xAC48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==44058== by 0xB18CD38: PetscInitialize (pinit.c:924) ==44058== by 0xA1C7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==44058== by 0xA1C7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==44058== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==44058== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==44058== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==44058== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==44058== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==44058== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==44058== ==44058== Open file descriptor 145: ==44058== ==44058== ==44058== Open file descriptor 142: ==44058== ==44058== ==44058== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==44058== ==44058== ==44058== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==44058== ==44058== ==44058== ==44058== HEAP SUMMARY: ==44058== in use at exit: 618,407 bytes in 8,239 blocks ==44058== total heap usage: 120,284 allocs, 112,045 frees, 1,366,535,923 bytes allocated ==44058== ==44058== LEAK SUMMARY: ==44058== definitely lost: 0 bytes in 0 blocks ==44058== indirectly lost: 0 bytes in 0 blocks ==44058== possibly lost: 0 bytes in 0 blocks ==44058== still reachable: 24 bytes in 2 blocks ==44058== suppressed: 618,383 bytes in 8,237 blocks ==44058== Reachable blocks (those to which a pointer was found) are not shown. ==44058== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==44058== ==44058== For lists of detected and suppressed errors, rerun with: -s ==44058== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)