==25461== Memcheck, a memory error detector ==25461== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25461== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25461== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25461== Parent PID: 23992 ==25461== ==25461== ==25461== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25461== Open file descriptor 12: ==25461== at 0x1110E0ED: pipe (pipe.c:29) ==25461== by 0x1973307D: ??? ==25461== by 0x14CE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25461== by 0x10D5B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25461== by 0x10CF4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25461== by 0xF9EBD38: PetscInitialize (pinit.c:924) ==25461== by 0xF515E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25461== by 0xF515EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25461== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25461== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25461== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25461== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25461== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25461== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25461== ==25461== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25461== at 0x11112A8C: __open_nocancel (open64_nocancel.c:39) ==25461== by 0x11096BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25461== by 0xF552822: ??? ==25461== by 0xF55296F: ??? ==25461== by 0x14D886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25461== by 0x14D88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25461== by 0x14D3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25461== by 0x14CE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25461== by 0x10D5B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25461== by 0x10CF4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25461== by 0xF9EBD38: PetscInitialize (pinit.c:924) ==25461== by 0xF515E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25461== by 0xF515EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25461== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25461== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25461== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25461== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25461== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25461== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25461== ==25461== Open file descriptor 145: ==25461== ==25461== ==25461== Open file descriptor 142: ==25461== ==25461== ==25461== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==25461== ==25461== ==25461== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25461== ==25461== ==25461== ==25461== HEAP SUMMARY: ==25461== in use at exit: 618,366 bytes in 8,236 blocks ==25461== total heap usage: 5,634,866 allocs, 5,626,630 frees, 1,933,092,367 bytes allocated ==25461== ==25461== LEAK SUMMARY: ==25461== definitely lost: 0 bytes in 0 blocks ==25461== indirectly lost: 0 bytes in 0 blocks ==25461== possibly lost: 0 bytes in 0 blocks ==25461== still reachable: 56 bytes in 3 blocks ==25461== suppressed: 618,310 bytes in 8,233 blocks ==25461== Reachable blocks (those to which a pointer was found) are not shown. ==25461== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25461== ==25461== For lists of detected and suppressed errors, rerun with: -s ==25461== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)