==43486== Memcheck, a memory error detector ==43486== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43486== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43486== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==43486== Parent PID: 23992 ==43486== ==43486== ==43486== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43486== Open file descriptor 12: ==43486== at 0xA8E30ED: pipe (pipe.c:29) ==43486== by 0x1436407D: ??? ==43486== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43486== by 0xACAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43486== by 0xAC48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43486== by 0xB18CD38: PetscInitialize (pinit.c:924) ==43486== by 0xA1C7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43486== by 0xA1C7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43486== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43486== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43486== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43486== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43486== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43486== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43486== ==43486== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43486== at 0xA8E7A8C: __open_nocancel (open64_nocancel.c:39) ==43486== by 0xA86BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43486== by 0xA204822: ??? ==43486== by 0xA20496F: ??? ==43486== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43486== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43486== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43486== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43486== by 0xACAF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43486== by 0xAC48D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43486== by 0xB18CD38: PetscInitialize (pinit.c:924) ==43486== by 0xA1C7E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43486== by 0xA1C7EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43486== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43486== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43486== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43486== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43486== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43486== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43486== ==43486== Open file descriptor 145: ==43486== ==43486== ==43486== Open file descriptor 142: ==43486== ==43486== ==43486== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==43486== ==43486== ==43486== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43486== ==43486== ==43486== ==43486== HEAP SUMMARY: ==43486== in use at exit: 618,423 bytes in 8,239 blocks ==43486== total heap usage: 120,285 allocs, 112,046 frees, 1,366,536,557 bytes allocated ==43486== ==43486== LEAK SUMMARY: ==43486== definitely lost: 0 bytes in 0 blocks ==43486== indirectly lost: 0 bytes in 0 blocks ==43486== possibly lost: 0 bytes in 0 blocks ==43486== still reachable: 24 bytes in 2 blocks ==43486== suppressed: 618,399 bytes in 8,237 blocks ==43486== Reachable blocks (those to which a pointer was found) are not shown. ==43486== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43486== ==43486== For lists of detected and suppressed errors, rerun with: -s ==43486== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)