==41743== Memcheck, a memory error detector ==41743== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41743== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41743== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41743== Parent PID: 23964 ==41743== ==41743== ==41743== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41743== Open file descriptor 12: ==41743== at 0xC1200ED: pipe (pipe.c:29) ==41743== by 0x1436407D: ??? ==41743== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41743== by 0xBA28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41743== by 0xB9C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41743== by 0x8270D38: PetscInitialize (pinit.c:924) ==41743== by 0xB8F0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41743== by 0xB8F0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41743== by 0x140886: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41743== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41743== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41743== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41743== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41743== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41743== ==41743== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41743== at 0xC124A8C: __open_nocancel (open64_nocancel.c:39) ==41743== by 0xC0A8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41743== by 0x811A822: ??? ==41743== by 0x811A96F: ??? ==41743== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41743== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41743== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41743== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41743== by 0xBA28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41743== by 0xB9C1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41743== by 0x8270D38: PetscInitialize (pinit.c:924) ==41743== by 0xB8F0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41743== by 0xB8F0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41743== by 0x140886: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41743== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41743== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41743== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41743== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41743== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41743== ==41743== Open file descriptor 145: ==41743== ==41743== ==41743== Open file descriptor 142: ==41743== ==41743== ==41743== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41743== ==41743== ==41743== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41743== ==41743== ==41743== ==41743== HEAP SUMMARY: ==41743== in use at exit: 618,903 bytes in 8,249 blocks ==41743== total heap usage: 584,949 allocs, 576,700 frees, 1,549,324,001 bytes allocated ==41743== ==41743== LEAK SUMMARY: ==41743== definitely lost: 0 bytes in 0 blocks ==41743== indirectly lost: 0 bytes in 0 blocks ==41743== possibly lost: 0 bytes in 0 blocks ==41743== still reachable: 24 bytes in 2 blocks ==41743== suppressed: 618,879 bytes in 8,247 blocks ==41743== Reachable blocks (those to which a pointer was found) are not shown. ==41743== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41743== ==41743== For lists of detected and suppressed errors, rerun with: -s ==41743== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)