==25451== Memcheck, a memory error detector ==25451== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25451== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25451== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdes -malloc_debug -malloc_dump -memory_info ==25451== Parent PID: 23964 ==25451== ==25451== ==25451== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25451== Open file descriptor 12: ==25451== at 0x10E580ED: pipe (pipe.c:29) ==25451== by 0x1973307D: ??? ==25451== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25451== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25451== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25451== by 0xF64ED38: PetscInitialize (pinit.c:924) ==25451== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25451== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25451== by 0x12D4E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25451== by 0x12825D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25451== by 0x12ADE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25451== by 0x12AC80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25451== by 0x12B317: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25451== by 0x126685: main (TestCellBasedEllipticPdes.cpp:19) ==25451== ==25451== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25451== at 0x10E5CA8C: __open_nocancel (open64_nocancel.c:39) ==25451== by 0x10DE0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25451== by 0xF1B5822: ??? ==25451== by 0xF1B596F: ??? ==25451== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25451== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25451== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25451== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25451== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25451== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25451== by 0xF64ED38: PetscInitialize (pinit.c:924) ==25451== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25451== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25451== by 0x12D4E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25451== by 0x12825D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25451== by 0x12ADE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25451== by 0x12AC80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25451== by 0x12B317: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25451== by 0x126685: main (TestCellBasedEllipticPdes.cpp:19) ==25451== ==25451== Open file descriptor 145: ==25451== ==25451== ==25451== Open file descriptor 142: ==25451== ==25451== ==25451== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdes_valgrind.txt ==25451== ==25451== ==25451== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25451== ==25451== ==25451== ==25451== HEAP SUMMARY: ==25451== in use at exit: 618,439 bytes in 8,240 blocks ==25451== total heap usage: 75,778 allocs, 67,538 frees, 1,343,391,104 bytes allocated ==25451== ==25451== LEAK SUMMARY: ==25451== definitely lost: 0 bytes in 0 blocks ==25451== indirectly lost: 0 bytes in 0 blocks ==25451== possibly lost: 0 bytes in 0 blocks ==25451== still reachable: 56 bytes in 3 blocks ==25451== suppressed: 618,383 bytes in 8,237 blocks ==25451== Reachable blocks (those to which a pointer was found) are not shown. ==25451== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25451== ==25451== For lists of detected and suppressed errors, rerun with: -s ==25451== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)