==25406== Memcheck, a memory error detector ==25406== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25406== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25406== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25406== Parent PID: 23964 ==25406== ==25406== ==25406== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25406== Open file descriptor 12: ==25406== at 0xF8780ED: pipe (pipe.c:29) ==25406== by 0x1973507D: ??? ==25406== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25406== by 0x10170418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25406== by 0x10109D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25406== by 0x102F9D38: PetscInitialize (pinit.c:924) ==25406== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25406== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25406== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25406== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25406== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25406== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25406== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25406== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25406== ==25406== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25406== at 0xF87CA8C: __open_nocancel (open64_nocancel.c:39) ==25406== by 0xF800BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25406== by 0xF1B5822: ??? ==25406== by 0xF1B596F: ??? ==25406== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25406== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25406== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25406== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25406== by 0x10170418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25406== by 0x10109D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25406== by 0x102F9D38: PetscInitialize (pinit.c:924) ==25406== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25406== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25406== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25406== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25406== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25406== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25406== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25406== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25406== ==25406== Open file descriptor 145: ==25406== ==25406== ==25406== Open file descriptor 142: ==25406== ==25406== ==25406== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25406== ==25406== ==25406== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25406== ==25406== ==25406== ==25406== HEAP SUMMARY: ==25406== in use at exit: 618,503 bytes in 8,241 blocks ==25406== total heap usage: 69,405 allocs, 61,164 frees, 1,341,035,986 bytes allocated ==25406== ==25406== LEAK SUMMARY: ==25406== definitely lost: 0 bytes in 0 blocks ==25406== indirectly lost: 0 bytes in 0 blocks ==25406== possibly lost: 0 bytes in 0 blocks ==25406== still reachable: 120 bytes in 4 blocks ==25406== suppressed: 618,383 bytes in 8,237 blocks ==25406== Reachable blocks (those to which a pointer was found) are not shown. ==25406== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25406== ==25406== For lists of detected and suppressed errors, rerun with: -s ==25406== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)