==25537== Memcheck, a memory error detector ==25537== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25537== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25537== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdes -malloc_debug -malloc_dump -memory_info ==25537== Parent PID: 24065 ==25537== ==25537== ==25537== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25537== Open file descriptor 12: ==25537== at 0x10E580ED: pipe (pipe.c:29) ==25537== by 0x1973307D: ??? ==25537== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25537== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25537== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25537== by 0xF64ED38: PetscInitialize (pinit.c:924) ==25537== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25537== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25537== by 0x12D4E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25537== by 0x12825D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25537== by 0x12ADE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25537== by 0x12AC80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25537== by 0x12B317: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25537== by 0x126685: main (TestCellBasedEllipticPdes.cpp:19) ==25537== ==25537== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25537== at 0x10E5CA8C: __open_nocancel (open64_nocancel.c:39) ==25537== by 0x10DE0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25537== by 0xF1B5822: ??? ==25537== by 0xF1B596F: ??? ==25537== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25537== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25537== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25537== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25537== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25537== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25537== by 0xF64ED38: PetscInitialize (pinit.c:924) ==25537== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25537== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25537== by 0x12D4E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25537== by 0x12825D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25537== by 0x12ADE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25537== by 0x12AC80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25537== by 0x12B317: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25537== by 0x126685: main (TestCellBasedEllipticPdes.cpp:19) ==25537== ==25537== Open file descriptor 145: ==25537== ==25537== ==25537== Open file descriptor 142: ==25537== ==25537== ==25537== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdes_valgrind.txt ==25537== ==25537== ==25537== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25537== ==25537== ==25537== ==25537== HEAP SUMMARY: ==25537== in use at exit: 638,074 bytes in 8,478 blocks ==25537== total heap usage: 76,305 allocs, 67,827 frees, 1,344,554,334 bytes allocated ==25537== ==25537== LEAK SUMMARY: ==25537== definitely lost: 0 bytes in 0 blocks ==25537== indirectly lost: 0 bytes in 0 blocks ==25537== possibly lost: 0 bytes in 0 blocks ==25537== still reachable: 56 bytes in 3 blocks ==25537== suppressed: 638,018 bytes in 8,475 blocks ==25537== Reachable blocks (those to which a pointer was found) are not shown. ==25537== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25537== ==25537== For lists of detected and suppressed errors, rerun with: -s ==25537== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)