==25956== Memcheck, a memory error detector ==25956== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25956== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25956== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellKillers -malloc_debug -malloc_dump -memory_info ==25956== Parent PID: 24065 ==25956== ==25956== ==25956== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25956== Open file descriptor 12: ==25956== at 0x10E580ED: pipe (pipe.c:29) ==25956== by 0x1973307D: ??? ==25956== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25956== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25956== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25956== by 0xF64ED38: PetscInitialize (pinit.c:924) ==25956== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25956== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25956== by 0x1A5381: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25956== by 0x19D279: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25956== by 0x1A08BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25956== by 0x1A075C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25956== by 0x1A0DF3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25956== by 0x19B695: main (TestCellKillers.cpp:19) ==25956== ==25956== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25956== at 0x10E5CA8C: __open_nocancel (open64_nocancel.c:39) ==25956== by 0x10DE0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25956== by 0xF1B5822: ??? ==25956== by 0xF1B596F: ??? ==25956== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25956== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25956== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25956== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25956== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25956== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25956== by 0xF64ED38: PetscInitialize (pinit.c:924) ==25956== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25956== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25956== by 0x1A5381: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25956== by 0x19D279: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25956== by 0x1A08BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25956== by 0x1A075C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25956== by 0x1A0DF3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25956== by 0x19B695: main (TestCellKillers.cpp:19) ==25956== ==25956== Open file descriptor 145: ==25956== ==25956== ==25956== Open file descriptor 142: ==25956== ==25956== ==25956== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellKillers_valgrind.txt ==25956== ==25956== ==25956== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25956== ==25956== ==25956== ==25956== HEAP SUMMARY: ==25956== in use at exit: 638,074 bytes in 8,478 blocks ==25956== total heap usage: 122,813 allocs, 114,335 frees, 1,345,870,419 bytes allocated ==25956== ==25956== LEAK SUMMARY: ==25956== definitely lost: 0 bytes in 0 blocks ==25956== indirectly lost: 0 bytes in 0 blocks ==25956== possibly lost: 0 bytes in 0 blocks ==25956== still reachable: 56 bytes in 3 blocks ==25956== suppressed: 638,018 bytes in 8,475 blocks ==25956== Reachable blocks (those to which a pointer was found) are not shown. ==25956== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25956== ==25956== For lists of detected and suppressed errors, rerun with: -s ==25956== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)