==24069== Memcheck, a memory error detector ==24069== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24069== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24069== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==24069== Parent PID: 24065 ==24069== ==24069== ==24069== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24069== Open file descriptor 12: ==24069== at 0x4CC30ED: pipe (pipe.c:29) ==24069== by 0xAEBB07D: ??? ==24069== by 0x644B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24069== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24069== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24069== by 0x5047D38: PetscInitialize (pinit.c:924) ==24069== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24069== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24069== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==24069== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==24069== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==24069== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==24069== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==24069== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==24069== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24069== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24069== by 0x110C15: main (TestCitations.cpp:18) ==24069== ==24069== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24069== at 0x4CC7A8C: __open_nocancel (open64_nocancel.c:39) ==24069== by 0x4C4BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24069== by 0x4945822: ??? ==24069== by 0x494596F: ??? ==24069== by 0x64F26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24069== by 0x64F2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24069== by 0x64A8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24069== by 0x644B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24069== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24069== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24069== by 0x5047D38: PetscInitialize (pinit.c:924) ==24069== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24069== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24069== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==24069== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==24069== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==24069== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==24069== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==24069== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==24069== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24069== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24069== by 0x110C15: main (TestCitations.cpp:18) ==24069== ==24069== Open file descriptor 145: ==24069== ==24069== ==24069== Open file descriptor 142: ==24069== ==24069== ==24069== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==24069== ==24069== ==24069== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24069== ==24069== ==24069== ==24069== HEAP SUMMARY: ==24069== in use at exit: 637,578 bytes in 8,477 blocks ==24069== total heap usage: 45,758 allocs, 37,281 frees, 1,339,831,216 bytes allocated ==24069== ==24069== LEAK SUMMARY: ==24069== definitely lost: 0 bytes in 0 blocks ==24069== indirectly lost: 0 bytes in 0 blocks ==24069== possibly lost: 0 bytes in 0 blocks ==24069== still reachable: 24 bytes in 2 blocks ==24069== suppressed: 637,554 bytes in 8,475 blocks ==24069== Reachable blocks (those to which a pointer was found) are not shown. ==24069== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24069== ==24069== For lists of detected and suppressed errors, rerun with: -s ==24069== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)