==39935== Memcheck, a memory error detector ==39935== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39935== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39935== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewForceTutorial -malloc_debug -malloc_dump -memory_info ==39935== Parent PID: 24065 ==39935== ==39935== ==39935== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39935== Open file descriptor 12: ==39935== at 0x10E580ED: pipe (pipe.c:29) ==39935== by 0x1973307D: ??? ==39935== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39935== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39935== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39935== by 0xF64ED38: PetscInitialize (pinit.c:924) ==39935== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39935== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39935== by 0x14368F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39935== by 0x13E09F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39935== by 0x140942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39935== by 0x14083D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39935== by 0x140E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39935== by 0x13C895: main (TestCreatingAndUsingANewForceTutorial.cpp:18) ==39935== ==39935== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39935== at 0x10E5CA8C: __open_nocancel (open64_nocancel.c:39) ==39935== by 0x10DE0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39935== by 0xF1B5822: ??? ==39935== by 0xF1B596F: ??? ==39935== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39935== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39935== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39935== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39935== by 0x109BE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39935== by 0x10957D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39935== by 0xF64ED38: PetscInitialize (pinit.c:924) ==39935== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39935== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39935== by 0x14368F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39935== by 0x13E09F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39935== by 0x140942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39935== by 0x14083D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39935== by 0x140E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39935== by 0x13C895: main (TestCreatingAndUsingANewForceTutorial.cpp:18) ==39935== ==39935== Open file descriptor 145: ==39935== ==39935== ==39935== Open file descriptor 142: ==39935== ==39935== ==39935== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewForceTutorial_valgrind.txt ==39935== ==39935== ==39935== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39935== ==39935== ==39935== ==39935== HEAP SUMMARY: ==39935== in use at exit: 638,074 bytes in 8,478 blocks ==39935== total heap usage: 682,957 allocs, 674,479 frees, 1,551,765,064 bytes allocated ==39935== ==39935== LEAK SUMMARY: ==39935== definitely lost: 0 bytes in 0 blocks ==39935== indirectly lost: 0 bytes in 0 blocks ==39935== possibly lost: 0 bytes in 0 blocks ==39935== still reachable: 56 bytes in 3 blocks ==39935== suppressed: 638,018 bytes in 8,475 blocks ==39935== Reachable blocks (those to which a pointer was found) are not shown. ==39935== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39935== ==39935== For lists of detected and suppressed errors, rerun with: -s ==39935== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)