==40305== Memcheck, a memory error detector ==40305== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40305== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40305== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptCellsGenerator -malloc_debug -malloc_dump -memory_info ==40305== Parent PID: 24065 ==40305== ==40305== ==40305== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40305== Open file descriptor 12: ==40305== at 0x125EF0ED: pipe (pipe.c:29) ==40305== by 0x1B3F407D: ??? ==40305== by 0x165DF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40305== by 0x11EF7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40305== by 0x11E90D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40305== by 0x6210D38: PetscInitialize (pinit.c:924) ==40305== by 0x11DB6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40305== by 0x11DB6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40305== by 0x1222A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40305== by 0x11D653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40305== by 0x11FD06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40305== by 0x11FC01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40305== by 0x120215: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40305== by 0x11BE55: main (TestCryptCellsGenerator.cpp:18) ==40305== ==40305== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40305== at 0x125F3A8C: __open_nocancel (open64_nocancel.c:39) ==40305== by 0x12577BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40305== by 0x11DF3822: ??? ==40305== by 0x11DF396F: ??? ==40305== by 0x166846DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40305== by 0x16684938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40305== by 0x1663A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40305== by 0x165DF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40305== by 0x11EF7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40305== by 0x11E90D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40305== by 0x6210D38: PetscInitialize (pinit.c:924) ==40305== by 0x11DB6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40305== by 0x11DB6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40305== by 0x1222A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40305== by 0x11D653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40305== by 0x11FD06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40305== by 0x11FC01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40305== by 0x120215: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40305== by 0x11BE55: main (TestCryptCellsGenerator.cpp:18) ==40305== ==40305== Open file descriptor 145: ==40305== ==40305== ==40305== Open file descriptor 142: ==40305== ==40305== ==40305== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptCellsGenerator_valgrind.txt ==40305== ==40305== ==40305== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40305== ==40305== ==40305== ==40305== HEAP SUMMARY: ==40305== in use at exit: 638,218 bytes in 8,479 blocks ==40305== total heap usage: 87,854 allocs, 79,375 frees, 1,343,773,945 bytes allocated ==40305== ==40305== LEAK SUMMARY: ==40305== definitely lost: 0 bytes in 0 blocks ==40305== indirectly lost: 0 bytes in 0 blocks ==40305== possibly lost: 0 bytes in 0 blocks ==40305== still reachable: 184 bytes in 4 blocks ==40305== suppressed: 638,034 bytes in 8,475 blocks ==40305== Reachable blocks (those to which a pointer was found) are not shown. ==40305== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40305== ==40305== For lists of detected and suppressed errors, rerun with: -s ==40305== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)