==41127== Memcheck, a memory error detector ==41127== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41127== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41127== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMajorAirwaysCentreLinesCleaner -malloc_debug -malloc_dump -memory_info ==41127== Parent PID: 24065 ==41127== ==41127== ==41127== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41127== Open file descriptor 12: ==41127== at 0x82460ED: pipe (pipe.c:29) ==41127== by 0x107C807D: ??? ==41127== by 0xC02C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41127== by 0x7B4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41127== by 0x7AE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41127== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==41127== by 0x7A0DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41127== by 0x7A0DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41127== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41127== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41127== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41127== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41127== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41127== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==41127== ==41127== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41127== at 0x824AA8C: __open_nocancel (open64_nocancel.c:39) ==41127== by 0x81CEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41127== by 0x7A4A822: ??? ==41127== by 0x7A4A96F: ??? ==41127== by 0xC0D16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41127== by 0xC0D1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41127== by 0xC087922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41127== by 0xC02C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41127== by 0x7B4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41127== by 0x7AE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41127== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==41127== by 0x7A0DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41127== by 0x7A0DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41127== by 0x11675D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41127== by 0x1121F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41127== by 0x1146F0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41127== by 0x1145EB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41127== by 0x114BFF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41127== by 0x1109F5: main (TestMajorAirwaysCentreLinesCleaner.cpp:18) ==41127== ==41127== Open file descriptor 145: ==41127== ==41127== ==41127== Open file descriptor 142: ==41127== ==41127== ==41127== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMajorAirwaysCentreLinesCleaner_valgrind.txt ==41127== ==41127== ==41127== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41127== ==41127== ==41127== ==41127== HEAP SUMMARY: ==41127== in use at exit: 638,042 bytes in 8,477 blocks ==41127== total heap usage: 493,890 allocs, 485,413 frees, 1,358,752,451 bytes allocated ==41127== ==41127== LEAK SUMMARY: ==41127== definitely lost: 0 bytes in 0 blocks ==41127== indirectly lost: 0 bytes in 0 blocks ==41127== possibly lost: 0 bytes in 0 blocks ==41127== still reachable: 24 bytes in 2 blocks ==41127== suppressed: 638,018 bytes in 8,475 blocks ==41127== Reachable blocks (those to which a pointer was found) are not shown. ==41127== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41127== ==41127== For lists of detected and suppressed errors, rerun with: -s ==41127== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)