==41168== Memcheck, a memory error detector ==41168== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41168== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41168== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMatrixVentilationProblem -malloc_debug -malloc_dump -memory_info ==41168== Parent PID: 24065 ==41168== ==41168== ==41168== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41168== Open file descriptor 12: ==41168== at 0x81F60ED: pipe (pipe.c:29) ==41168== by 0x107C807D: ??? ==41168== by 0xC0794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41168== by 0x83F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41168== by 0x838AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41168== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==41168== by 0x7A0DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41168== by 0x7A0DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41168== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41168== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41168== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41168== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41168== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41168== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==41168== ==41168== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41168== at 0x81FAA8C: __open_nocancel (open64_nocancel.c:39) ==41168== by 0x817EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41168== by 0x7A4A822: ??? ==41168== by 0x7A4A96F: ??? ==41168== by 0xC11E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41168== by 0xC11E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41168== by 0xC0D4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41168== by 0xC0792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41168== by 0x83F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41168== by 0x838AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41168== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==41168== by 0x7A0DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41168== by 0x7A0DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41168== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41168== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41168== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41168== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41168== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41168== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==41168== ==41168== Open file descriptor 145: ==41168== ==41168== ==41168== Open file descriptor 142: ==41168== ==41168== ==41168== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMatrixVentilationProblem_valgrind.txt ==41168== ==41168== ==41168== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41168== ==41168== ==41168== ==41168== HEAP SUMMARY: ==41168== in use at exit: 638,042 bytes in 8,477 blocks ==41168== total heap usage: 137,992 allocs, 129,515 frees, 1,516,703,682 bytes allocated ==41168== ==41168== LEAK SUMMARY: ==41168== definitely lost: 0 bytes in 0 blocks ==41168== indirectly lost: 0 bytes in 0 blocks ==41168== possibly lost: 0 bytes in 0 blocks ==41168== still reachable: 24 bytes in 2 blocks ==41168== suppressed: 638,018 bytes in 8,475 blocks ==41168== Reachable blocks (those to which a pointer was found) are not shown. ==41168== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41168== ==41168== For lists of detected and suppressed errors, rerun with: -s ==41168== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)