==39735== Memcheck, a memory error detector ==39735== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39735== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39735== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVolumeTrackingModifier -malloc_debug -malloc_dump -memory_info ==39735== Parent PID: 24065 ==39735== ==39735== ==39735== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39735== Open file descriptor 12: ==39735== at 0xF8BA0ED: pipe (pipe.c:29) ==39735== by 0x1973507D: ??? ==39735== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39735== by 0x101B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39735== by 0x1014DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39735== by 0x102F9D38: PetscInitialize (pinit.c:924) ==39735== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39735== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39735== by 0x20339E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39735== by 0x1FB7BF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39735== by 0x1FEF52: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39735== by 0x1FEE4D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39735== by 0x1FF461: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39735== by 0x1F9FB5: main (TestVolumeTrackingModifier.cpp:18) ==39735== ==39735== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39735== at 0xF8BEA8C: __open_nocancel (open64_nocancel.c:39) ==39735== by 0xF842BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39735== by 0xF1B5822: ??? ==39735== by 0xF1B596F: ??? ==39735== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39735== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39735== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39735== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39735== by 0x101B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39735== by 0x1014DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39735== by 0x102F9D38: PetscInitialize (pinit.c:924) ==39735== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39735== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39735== by 0x20339E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39735== by 0x1FB7BF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39735== by 0x1FEF52: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39735== by 0x1FEE4D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39735== by 0x1FF461: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39735== by 0x1F9FB5: main (TestVolumeTrackingModifier.cpp:18) ==39735== ==39735== Open file descriptor 145: ==39735== ==39735== ==39735== Open file descriptor 142: ==39735== ==39735== ==39735== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVolumeTrackingModifier_valgrind.txt ==39735== ==39735== ==39735== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39735== ==39735== ==39735== ==39735== HEAP SUMMARY: ==39735== in use at exit: 638,017 bytes in 8,475 blocks ==39735== total heap usage: 11,631,556 allocs, 11,623,081 frees, 3,071,724,825 bytes allocated ==39735== ==39735== LEAK SUMMARY: ==39735== definitely lost: 0 bytes in 0 blocks ==39735== indirectly lost: 0 bytes in 0 blocks ==39735== possibly lost: 0 bytes in 0 blocks ==39735== still reachable: 72 bytes in 4 blocks ==39735== suppressed: 637,945 bytes in 8,471 blocks ==39735== Reachable blocks (those to which a pointer was found) are not shown. ==39735== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39735== ==39735== For lists of detected and suppressed errors, rerun with: -s ==39735== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)