==42390== Memcheck, a memory error detector ==42390== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42390== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42390== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==42390== Parent PID: 24038 ==42390== ==42390== ==42390== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42390== Open file descriptor 12: ==42390== at 0x85980ED: pipe (pipe.c:29) ==42390== by 0x1436407D: ??? ==42390== by 0xC8D64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42390== by 0x8966418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42390== by 0x88FFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42390== by 0x8E41D38: PetscInitialize (pinit.c:924) ==42390== by 0x81C1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42390== by 0x81C1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42390== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42390== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42390== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42390== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42390== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42390== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42390== ==42390== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42390== at 0x859CA8C: __open_nocancel (open64_nocancel.c:39) ==42390== by 0x8520BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42390== by 0x81FE822: ??? ==42390== by 0x81FE96F: ??? ==42390== by 0xC97B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42390== by 0xC97B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42390== by 0xC931922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42390== by 0xC8D62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42390== by 0x8966418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42390== by 0x88FFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42390== by 0x8E41D38: PetscInitialize (pinit.c:924) ==42390== by 0x81C1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42390== by 0x81C1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42390== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42390== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42390== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42390== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42390== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42390== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42390== ==42390== Open file descriptor 145: ==42390== ==42390== ==42390== Open file descriptor 142: ==42390== ==42390== ==42390== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==42390== ==42390== ==42390== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42390== ==42390== ==42390== ==42390== HEAP SUMMARY: ==42390== in use at exit: 618,423 bytes in 8,239 blocks ==42390== total heap usage: 49,018 allocs, 40,779 frees, 1,338,873,522 bytes allocated ==42390== ==42390== LEAK SUMMARY: ==42390== definitely lost: 0 bytes in 0 blocks ==42390== indirectly lost: 0 bytes in 0 blocks ==42390== possibly lost: 0 bytes in 0 blocks ==42390== still reachable: 24 bytes in 2 blocks ==42390== suppressed: 618,399 bytes in 8,237 blocks ==42390== Reachable blocks (those to which a pointer was found) are not shown. ==42390== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42390== ==42390== For lists of detected and suppressed errors, rerun with: -s ==42390== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)