==42587== Memcheck, a memory error detector ==42587== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42587== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42587== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCodegen -malloc_debug -malloc_dump -memory_info ==42587== Parent PID: 24120 ==42587== ==42587== ==42587== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42587== Open file descriptor 12: ==42587== at 0x9E2D0ED: pipe (pipe.c:29) ==42587== by 0x1436607D: ??? ==42587== by 0xEE564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42587== by 0x9993418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42587== by 0x992CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42587== by 0x8270D38: PetscInitialize (pinit.c:924) ==42587== by 0x985BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42587== by 0x985BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42587== by 0x135779: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42587== by 0x12FB0B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42587== by 0x132D44: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42587== by 0x132BE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42587== by 0x13327B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42587== by 0x12ADA5: main (TestCodegen.cpp:19) ==42587== ==42587== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42587== at 0x9E31A8C: __open_nocancel (open64_nocancel.c:39) ==42587== by 0x9DB5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42587== by 0x811A822: ??? ==42587== by 0x811A96F: ??? ==42587== by 0xEEFD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42587== by 0xEEFD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42587== by 0xEEB3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42587== by 0xEE562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42587== by 0x9993418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42587== by 0x992CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42587== by 0x8270D38: PetscInitialize (pinit.c:924) ==42587== by 0x985BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42587== by 0x985BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42587== by 0x135779: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42587== by 0x12FB0B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42587== by 0x132D44: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42587== by 0x132BE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42587== by 0x13327B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42587== by 0x12ADA5: main (TestCodegen.cpp:19) ==42587== ==42587== Open file descriptor 145: ==42587== ==42587== ==42587== Open file descriptor 142: ==42587== ==42587== ==42587== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCodegen_valgrind.txt ==42587== ==42587== ==42587== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42587== ==42587== ==42587== ==42587== HEAP SUMMARY: ==42587== in use at exit: 623,693 bytes in 8,247 blocks ==42587== total heap usage: 941,067 allocs, 932,820 frees, 2,144,435,062 bytes allocated ==42587== ==42587== LEAK SUMMARY: ==42587== definitely lost: 0 bytes in 0 blocks ==42587== indirectly lost: 0 bytes in 0 blocks ==42587== possibly lost: 0 bytes in 0 blocks ==42587== still reachable: 5,367 bytes in 14 blocks ==42587== suppressed: 618,326 bytes in 8,233 blocks ==42587== Reachable blocks (those to which a pointer was found) are not shown. ==42587== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42587== ==42587== For lists of detected and suppressed errors, rerun with: -s ==42587== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)