==42439== Memcheck, a memory error detector ==42439== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42439== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42439== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==42439== Parent PID: 24154 ==42439== ==42439== ==42439== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42439== Open file descriptor 12: ==42439== at 0x87DA0ED: pipe (pipe.c:29) ==42439== by 0x1436407D: ??? ==42439== by 0xC8D64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42439== by 0x8BA8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42439== by 0x8B41D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42439== by 0x9083D38: PetscInitialize (pinit.c:924) ==42439== by 0x8405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42439== by 0x8405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42439== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42439== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42439== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42439== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42439== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42439== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==42439== ==42439== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42439== at 0x87DEA8C: __open_nocancel (open64_nocancel.c:39) ==42439== by 0x8762BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42439== by 0x8442822: ??? ==42439== by 0x844296F: ??? ==42439== by 0xC97B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42439== by 0xC97B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42439== by 0xC931922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42439== by 0xC8D62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42439== by 0x8BA8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42439== by 0x8B41D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42439== by 0x9083D38: PetscInitialize (pinit.c:924) ==42439== by 0x8405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42439== by 0x8405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42439== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42439== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42439== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42439== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42439== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42439== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==42439== ==42439== Open file descriptor 145: ==42439== ==42439== ==42439== Open file descriptor 142: ==42439== ==42439== ==42439== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==42439== ==42439== ==42439== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42439== ==42439== ==42439== ==42439== HEAP SUMMARY: ==42439== in use at exit: 621,955 bytes in 8,243 blocks ==42439== total heap usage: 3,054,234 allocs, 3,045,991 frees, 1,613,058,543 bytes allocated ==42439== ==42439== LEAK SUMMARY: ==42439== definitely lost: 0 bytes in 0 blocks ==42439== indirectly lost: 0 bytes in 0 blocks ==42439== possibly lost: 0 bytes in 0 blocks ==42439== still reachable: 3,629 bytes in 10 blocks ==42439== suppressed: 618,326 bytes in 8,233 blocks ==42439== Reachable blocks (those to which a pointer was found) are not shown. ==42439== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42439== ==42439== For lists of detected and suppressed errors, rerun with: -s ==42439== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)