==43867== Memcheck, a memory error detector ==43867== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43867== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43867== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHeterogeneousConductivities -malloc_debug -malloc_dump -memory_info ==43867== Parent PID: 24023 ==43867== ==43867== ==43867== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43867== Open file descriptor 12: ==43867== at 0xA8170ED: pipe (pipe.c:29) ==43867== by 0x1435E07D: ??? ==43867== by 0xD5F64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43867== by 0xABE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43867== by 0xAB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43867== by 0xB0C0D38: PetscInitialize (pinit.c:924) ==43867== by 0xA0FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43867== by 0xA0FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43867== by 0x11BF54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43867== by 0x1174B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43867== by 0x119942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43867== by 0x11983E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43867== by 0x119E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43867== by 0x115CB5: main (TestHeterogeneousConductivities.cpp:18) ==43867== ==43867== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43867== at 0xA81BA8C: __open_nocancel (open64_nocancel.c:39) ==43867== by 0xA79FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43867== by 0xA133822: ??? ==43867== by 0xA13396F: ??? ==43867== by 0xD69B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43867== by 0xD69B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43867== by 0xD651922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43867== by 0xD5F62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43867== by 0xABE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43867== by 0xAB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43867== by 0xB0C0D38: PetscInitialize (pinit.c:924) ==43867== by 0xA0FBE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43867== by 0xA0FBEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43867== by 0x11BF54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43867== by 0x1174B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43867== by 0x119942: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43867== by 0x11983E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43867== by 0x119E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43867== by 0x115CB5: main (TestHeterogeneousConductivities.cpp:18) ==43867== ==43867== Open file descriptor 145: ==43867== ==43867== ==43867== Open file descriptor 142: ==43867== ==43867== ==43867== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHeterogeneousConductivities_valgrind.txt ==43867== ==43867== ==43867== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43867== ==43867== ==43867== ==43867== HEAP SUMMARY: ==43867== in use at exit: 638,522 bytes in 8,487 blocks ==43867== total heap usage: 202,015 allocs, 193,528 frees, 1,373,728,628 bytes allocated ==43867== ==43867== LEAK SUMMARY: ==43867== definitely lost: 0 bytes in 0 blocks ==43867== indirectly lost: 0 bytes in 0 blocks ==43867== possibly lost: 0 bytes in 0 blocks ==43867== still reachable: 24 bytes in 2 blocks ==43867== suppressed: 638,498 bytes in 8,485 blocks ==43867== Reachable blocks (those to which a pointer was found) are not shown. ==43867== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43867== ==43867== For lists of detected and suppressed errors, rerun with: -s ==43867== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 35)