==40938== Memcheck, a memory error detector ==40938== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40938== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40938== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==40938== Parent PID: 23993 ==40938== ==40938== ==40938== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40938== Open file descriptor 12: ==40938== at 0xBC3D0ED: pipe (pipe.c:29) ==40938== by 0x1435F07D: ??? ==40938== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40938== by 0xB545418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40938== by 0xB4DED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40938== by 0x8209D38: PetscInitialize (pinit.c:924) ==40938== by 0xB3EAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40938== by 0xB3EAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40938== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40938== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40938== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40938== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40938== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40938== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==40938== ==40938== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40938== at 0xBC41A8C: __open_nocancel (open64_nocancel.c:39) ==40938== by 0xBBC5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40938== by 0xB422822: ??? ==40938== by 0xB42296F: ??? ==40938== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40938== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40938== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40938== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40938== by 0xB545418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40938== by 0xB4DED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40938== by 0x8209D38: PetscInitialize (pinit.c:924) ==40938== by 0xB3EAE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40938== by 0xB3EAEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40938== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40938== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40938== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40938== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40938== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40938== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==40938== ==40938== Open file descriptor 145: ==40938== ==40938== ==40938== Open file descriptor 142: ==40938== ==40938== ==40938== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==40938== ==40938== ==40938== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40938== ==40938== ==40938== ==40938== HEAP SUMMARY: ==40938== in use at exit: 618,887 bytes in 8,249 blocks ==40938== total heap usage: 428,267 allocs, 420,018 frees, 1,437,732,967 bytes allocated ==40938== ==40938== LEAK SUMMARY: ==40938== definitely lost: 0 bytes in 0 blocks ==40938== indirectly lost: 0 bytes in 0 blocks ==40938== possibly lost: 0 bytes in 0 blocks ==40938== still reachable: 24 bytes in 2 blocks ==40938== suppressed: 618,863 bytes in 8,247 blocks ==40938== Reachable blocks (those to which a pointer was found) are not shown. ==40938== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40938== ==40938== For lists of detected and suppressed errors, rerun with: -s ==40938== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 55 from 38)