==42041== Memcheck, a memory error detector ==42041== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42041== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42041== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==42041== Parent PID: 24330 ==42041== ==42041== ==42041== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42041== Open file descriptor 12: ==42041== at 0xAC270ED: pipe (pipe.c:29) ==42041== by 0x1435F07D: ??? ==42041== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42041== by 0xAFF5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42041== by 0xAF8ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42041== by 0xB4D0D38: PetscInitialize (pinit.c:924) ==42041== by 0xA50BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42041== by 0xA50BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42041== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42041== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42041== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42041== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42041== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42041== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==42041== ==42041== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42041== at 0xAC2BA8C: __open_nocancel (open64_nocancel.c:39) ==42041== by 0xABAFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42041== by 0xA543822: ??? ==42041== by 0xA54396F: ??? ==42041== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42041== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42041== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42041== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42041== by 0xAFF5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42041== by 0xAF8ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42041== by 0xB4D0D38: PetscInitialize (pinit.c:924) ==42041== by 0xA50BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42041== by 0xA50BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42041== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42041== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42041== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42041== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42041== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42041== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==42041== ==42041== Open file descriptor 145: ==42041== ==42041== ==42041== Open file descriptor 142: ==42041== ==42041== ==42041== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==42041== ==42041== ==42041== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42041== ==42041== ==42041== ==42041== HEAP SUMMARY: ==42041== in use at exit: 15,892 bytes in 60 blocks ==42041== total heap usage: 449,637 allocs, 449,577 frees, 113,963,358 bytes allocated ==42041== ==42041== LEAK SUMMARY: ==42041== definitely lost: 0 bytes in 0 blocks ==42041== indirectly lost: 0 bytes in 0 blocks ==42041== possibly lost: 0 bytes in 0 blocks ==42041== still reachable: 24 bytes in 2 blocks ==42041== suppressed: 15,868 bytes in 58 blocks ==42041== Reachable blocks (those to which a pointer was found) are not shown. ==42041== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42041== ==42041== For lists of detected and suppressed errors, rerun with: -s ==42041== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 60 from 34)