==24685== Memcheck, a memory error detector ==24685== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24685== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24685== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==24685== Parent PID: 24429 ==24685== ==24685== ==24685== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24685== Open file descriptor 12: ==24685== at 0x61ED0FD: pipe (pipe.c:29) ==24685== by 0xAF2B07D: ??? ==24685== by 0x8A404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24685== by 0x5E3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24685== by 0x5DD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24685== by 0x49C3D38: PetscInitialize (pinit.c:924) ==24685== by 0x5CF9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24685== by 0x5CF9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24685== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24685== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24685== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24685== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24685== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24685== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==24685== ==24685== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24685== at 0x61F1A9C: __open_nocancel (open64_nocancel.c:39) ==24685== by 0x6175BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24685== by 0x5D31822: ??? ==24685== by 0x5D3196F: ??? ==24685== by 0x8AE76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24685== by 0x8AE7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24685== by 0x8A9D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24685== by 0x8A402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24685== by 0x5E3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24685== by 0x5DD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24685== by 0x49C3D38: PetscInitialize (pinit.c:924) ==24685== by 0x5CF9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24685== by 0x5CF9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24685== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24685== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24685== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24685== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24685== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24685== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==24685== ==24685== Open file descriptor 145: ==24685== ==24685== ==24685== Open file descriptor 142: ==24685== ==24685== ==24685== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==24685== ==24685== ==24685== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24685== ==24685== ==24685== ==24685== HEAP SUMMARY: ==24685== in use at exit: 14,932 bytes in 50 blocks ==24685== total heap usage: 44,997 allocs, 44,947 frees, 8,924,727 bytes allocated ==24685== ==24685== LEAK SUMMARY: ==24685== definitely lost: 0 bytes in 0 blocks ==24685== indirectly lost: 0 bytes in 0 blocks ==24685== possibly lost: 0 bytes in 0 blocks ==24685== still reachable: 24 bytes in 2 blocks ==24685== suppressed: 14,908 bytes in 48 blocks ==24685== Reachable blocks (those to which a pointer was found) are not shown. ==24685== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24685== ==24685== For lists of detected and suppressed errors, rerun with: -s ==24685== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)