==25477== Memcheck, a memory error detector ==25477== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25477== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25477== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestAbstractOdeSystem -malloc_debug -malloc_dump -memory_info ==25477== Parent PID: 24330 ==25477== ==25477== ==25477== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25477== Open file descriptor 12: ==25477== at 0x64180FD: pipe (pipe.c:29) ==25477== by 0xB1F707D: ??? ==25477== by 0x8CEF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25477== by 0x6067418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25477== by 0x6000D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25477== by 0x4CF7D38: PetscInitialize (pinit.c:924) ==25477== by 0x4B4AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25477== by 0x4B4AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25477== by 0x138AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25477== by 0x1325E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25477== by 0x135746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25477== by 0x1355E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25477== by 0x135C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25477== by 0x12FE55: main (TestAbstractOdeSystem.cpp:19) ==25477== ==25477== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25477== at 0x641CA9C: __open_nocancel (open64_nocancel.c:39) ==25477== by 0x63A0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25477== by 0x4B82822: ??? ==25477== by 0x4B8296F: ??? ==25477== by 0x8D946DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25477== by 0x8D94938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25477== by 0x8D4A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25477== by 0x8CEF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25477== by 0x6067418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25477== by 0x6000D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25477== by 0x4CF7D38: PetscInitialize (pinit.c:924) ==25477== by 0x4B4AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25477== by 0x4B4AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25477== by 0x138AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25477== by 0x1325E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25477== by 0x135746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25477== by 0x1355E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25477== by 0x135C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25477== by 0x12FE55: main (TestAbstractOdeSystem.cpp:19) ==25477== ==25477== Open file descriptor 145: ==25477== ==25477== ==25477== Open file descriptor 142: ==25477== ==25477== ==25477== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractOdeSystem_valgrind.txt ==25477== ==25477== ==25477== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25477== ==25477== ==25477== ==25477== HEAP SUMMARY: ==25477== in use at exit: 34,783 bytes in 289 blocks ==25477== total heap usage: 30,076 allocs, 29,787 frees, 7,281,650 bytes allocated ==25477== ==25477== LEAK SUMMARY: ==25477== definitely lost: 0 bytes in 0 blocks ==25477== indirectly lost: 0 bytes in 0 blocks ==25477== possibly lost: 0 bytes in 0 blocks ==25477== still reachable: 24 bytes in 2 blocks ==25477== suppressed: 34,759 bytes in 287 blocks ==25477== Reachable blocks (those to which a pointer was found) are not shown. ==25477== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25477== ==25477== For lists of detected and suppressed errors, rerun with: -s ==25477== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)