==26489== Memcheck, a memory error detector ==26489== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26489== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26489== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDiscreteSystemForceCalculator -malloc_debug -malloc_dump -memory_info ==26489== Parent PID: 24330 ==26489== ==26489== ==26489== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26489== Open file descriptor 12: ==26489== at 0x10D2F0FD: pipe (pipe.c:29) ==26489== by 0x1972E07D: ??? ==26489== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26489== by 0x1097C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26489== by 0x10915D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26489== by 0xF60CD38: PetscInitialize (pinit.c:924) ==26489== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26489== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26489== by 0x12A32F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26489== by 0x123F2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26489== by 0x1269BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26489== by 0x12685E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26489== by 0x126EF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26489== by 0x122355: main (TestDiscreteSystemForceCalculator.cpp:19) ==26489== ==26489== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26489== at 0x10D33A9C: __open_nocancel (open64_nocancel.c:39) ==26489== by 0x10CB7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26489== by 0xF1B0822: ??? ==26489== by 0xF1B096F: ??? ==26489== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26489== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26489== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26489== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26489== by 0x1097C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26489== by 0x10915D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26489== by 0xF60CD38: PetscInitialize (pinit.c:924) ==26489== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26489== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26489== by 0x12A32F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26489== by 0x123F2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26489== by 0x1269BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26489== by 0x12685E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26489== by 0x126EF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26489== by 0x122355: main (TestDiscreteSystemForceCalculator.cpp:19) ==26489== ==26489== Open file descriptor 145: ==26489== ==26489== ==26489== Open file descriptor 142: ==26489== ==26489== ==26489== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDiscreteSystemForceCalculator_valgrind.txt ==26489== ==26489== ==26489== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26489== ==26489== ==26489== ==26489== HEAP SUMMARY: ==26489== in use at exit: 35,215 bytes in 290 blocks ==26489== total heap usage: 107,630 allocs, 107,340 frees, 14,474,177 bytes allocated ==26489== ==26489== LEAK SUMMARY: ==26489== definitely lost: 0 bytes in 0 blocks ==26489== indirectly lost: 0 bytes in 0 blocks ==26489== possibly lost: 0 bytes in 0 blocks ==26489== still reachable: 56 bytes in 3 blocks ==26489== suppressed: 35,159 bytes in 287 blocks ==26489== Reachable blocks (those to which a pointer was found) are not shown. ==26489== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26489== ==26489== For lists of detected and suppressed errors, rerun with: -s ==26489== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)